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Protein Overview: spo20

General Information:
Name(s) found: spo20 / SPAC3H8.10 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • sec14 cytosolic factor family Sec14 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    prospore membrane [IDALink to PubMed article]
    cytosol [ISSLink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    regulation of filamentous growth [IMPLink to PubMed article]
    Golgi to plasma membrane transport [IMPLink to PubMed article]
    ascospore-type prospore formation [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    phospholipid transport [IGILink to PubMed article]
    Molecular Function: phosphatidylinositol transporter activity [ISS]
    phosphatidylcholine transmembrane transporter activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETISDPYP LTNPNAPLGH PGHLNSTQQA TLDSMRLELQ KLGYTERLDD ATLLRFLRAR  60
   61 KFNLQQSLEM FIKCEKWRKE FGVDDLIKNF HYDEKEAVSK YYPQFYHKTD IDGRPVYVEQ 120
  121 LGNIDLKKLY QITTPERMMQ NLVYEYEMLA LKRFPACSRK AGGLIETSCT IMDLKGVGIT 180
  181 SIHSVYSYIR QASSISQDYY PERMGKFYVI NAPWGFSSAF NLIKGFLDEA TVKKIHILGS 240
  241 NYKSALLEQI PADNLPAKLG GNCQCPGGCE LSDAGPWHEE QWMNKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 76.0 PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • vitamin E binding
    		•  7.60287756659728 bayes_pls_golite062009
  • phospholipid transporter activity
    		•  4.82372291869245 bayes_pls_golite062009
  • retinoid binding
    		•  4.17745094732125 bayes_pls_golite062009
  • isoprenoid binding
    		•  4.04814419024697 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.98714900064429 bayes_pls_golite062009
  • phosphatidylinositol transporter activity
    		•  3.08477039249457 bayes_pls_golite062009
  • transporter activity
    		•  2.25865143268098 bayes_pls_golite062009
  • binding
    		•  2.07034659478808 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.84980732779905 bayes_pls_golite062009
  • vitamin binding
    		•  1.77103204070558 bayes_pls_golite062009
  • retinal binding
    		•  1.32654212303069 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.14391953556505 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.418179505285201 bayes_pls_golite062009
  • protein binding
    		•  0.408110742195811 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.265815679858875 bayes_pls_golite062009
  • protein transporter activity
    		•  0.0570899657188049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle