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Protein Overview: SPBC8D2.18c

General Information:
Name(s) found: SPBC8D2.18c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • adenosylhomocysteinase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: one-carbon metabolic process [IEA]
    methionine metabolic process [ISSLink to PubMed article]
    selenocysteine metabolic process [ISSLink to PubMed article]
    Molecular Function: adenosylhomocysteinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQNYKVAD ISLAAFGRKE LEIAENEMPG LIAVREKYAK SQPLKGARIA GCLHMTIQTA  60
   61 VLIETLVALG AEVTWSSCNI YSTQDHAAAA IAATGVPVFA WKGETEEEYL WCIEQQLKSF 120
  121 PSGKPLNMIL DDGGDLTALV HERHPELLVD IRGISEETTT GVHNLYKMFK ENKLKVPAIN 180
  181 VNDSVTKSKF DNLFGCKESL VDGIKRATDV MIAGKVAVVA GFGDVGKGCS TSLRSQGARV 240
  241 IVTEVDPINA LQAAMDGFEV TTMEEAVKEG QIFVTTTGCR DIIRGEHFNE MKEDSIVCNI 300
  301 GHFDVEIDVA WLKANAKDVV NIKPQVDRYE LKNGRHIILL ADGRLVNLGC ATGHPSFVMS 360
  361 CSFTNQVLAQ IALWTDNTSY PLGVHMLPKK LDEEVARLHL GKLGVKLTTL TSVQSDYLGI 420
  421 PVDGPYKADH YRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..433] PSI-BLAST 156.0 K185N mutated S-adenosylhomocysteine hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenosylhomocysteinase activity
    		•  4.75102111339352 bayes_pls_golite062009
  • trialkylsulfonium hydrolase activity
    		•  4.75102111339352 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9367410227151 bayes_pls_golite062009
  • binding
    		•  0.784517759335365 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • DNA binding
    		•  0.158019531459925 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0191997392158629 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.012678711735872 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle