YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rpa12

General Information:
Name(s) found: rpa12 / SPCC1259.03 [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • gi|9297043|sp|O94703.1|RPA12_SCHPO RecName: Full=DNA-directed RNA polymerase I subunit RPA12; AltName: Full=DNA-directed RNA polymerase I 13.1 kDa polypeptide [NCBI NR]
  • gi|8886803|gb|AAF80580.1|AF219943_1 RNA polymerase I specific subunit Rpa12 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T40892 dna-directed rna polymerase i subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6519808|dbj|BAA87930.1| SpRPA12 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|6518899|dbj|BAA87928.1| RPA12 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|4049536|emb|CAA22541.1| DNA-directed RNA polymerase complex I subunit Rpa12 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075559|ref|NP_588059.1| DNA-directed RNA polymerase complex I subunit Rpa12 [Schizosaccharomyces pombe] [NCBI NR]
  • DNA-directed RNA polymerase complex I subunit Rpa12 [Sanger Pombe]
  • DNA-directed RNA polymerase I 13.1 kDa polypeptide (EC 2.7.7.6) - Schizosaccharomyces pombe (Fission yeast) [Swiss-Prot]
  • DNA-directed RNA polymerase I subunit RPA12 OS=Schizosaccharomyces pombe GN=rpa12 PE=2 SV=1 [Swiss-Prot]
  • DNA-DIRECTED RNA POLYMERASE I SUBUNIT: O94703; [pompepVF.fasta]
  • DNA-directed RNA polymerase I 13.1 kDa polypeptide (EC 2.7.7.6) [pompep4896]
  • |rpa12||DNA-directed RNA polymerase I subunit [pompepnew.fasta]
  • |rpa12||DNA-directed RNA polymerase activity (PMID 11254133)|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • dna-directed rna polymerase i subunit [Schizosaccharomyces pombe]gi|4049536|emb|CAA22541.1| SPCC1259.03 [Schizosaccharomyces pombe]gi|9297043|sp|O94703|RPA9_SCHPO DNA-directed RNA polymerase I 13.1 kDa polypeptidegi|7490485|pir||T40892 dna-directed rna [nrdb_11152004_Chlamydomonas]
  • |rpa12||DNA-directed RNA polymerase subunit |Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (O94703) DNA-directed RNA polymerase I 13.1 kDa polypeptide (EC 2.7.7.6) [pompep4896_normal_reversed]
  • |rpa12||DNA-directed RNA polymerase complex I subunit Rpa12|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • RNA polymerase I specific subunit Rpa12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • DNA-directed RNA polymerase I 13.1 kDa polypeptide [nr-271106-contam.fasta]
  • SpRPA12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPCC1259.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC1259.03 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • RPA12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • DNA-directed RNA polymerase I subunit RPA12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpa12 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 119 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    DNA-directed RNA polymerase I complex [IGILink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase I promoter [IGILink to PubMed article]
    transcription termination [IGILink to PubMed article]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [IGILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIGSLIFC SECGNLLEST TAQWTTCDQC QSVYPSEQFA NLVVETKSSA SAFPSALKLK  60
   61 HSIVQVESQK EEAATIEEKC PKCGNDHMTF HTLQLRSADE GSTVFYECPR CAYKFSTNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 20.0 RBP9 subunit of RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle