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Protein Overview: rik1

General Information:
Name(s) found: rik1 / SPCC11E10.08 [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • silencing protein Rik1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1040 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [TASLink to PubMed article]
    CLRC ubiquitin ligase complex [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    Biological Process: meiotic telomere clustering [IMPLink to PubMed article]
    dynein-driven meiotic oscillatory nuclear movement [IGILink to PubMed article]
    positive regulation of histone H3-K9 methylation [IMPLink to PubMed article]
    chromatin silencing at centromere [IMPLink to PubMed article]
    negative regulation of histone H3-K4 methylation [IMPLink to PubMed article]
    [NOT]telomere maintenance [IMPLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IMPLink to PubMed article]
    donor selection [IMPLink to PubMed article]
    chromatin silencing at telomere [TASLink to PubMed article]
    cellular protein localization [IGILink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALCVHSFWA TAVDTATSCH FISSENCLVL LQALKINIYL CSEVHGLQFF TSIPLFSTVK  60
   61 HIRPYRPPGL DRDYLFVVLN DDTYFSIYWD EDYQKVIVDH PPVRYRVTFP WNRNAKSYCL 120
  121 VDLRMRAIFL SIDEISMICI RILSAEERLK TGRSIDSGFP FSFPVHLIYD MCILNDSSTP 180
  181 TLVVLHSDGL DCYVTAFLLD LSSKSLGKGI RLFERVKPSM IMPFGKRGLL VFESLFIHCM 240
  241 YRGNFVTING PCTTYMHWTP LKGQKMHYIV CDTNGYLFGV YSSILGKNKW SLVMERLPIP 300
  301 PFDFITSLNS IHEGLLFIGS KNSESKLINL STLKDVDSIP NLGPIHDLLV LKNDIEKSFL 360
  361 VCAGTPRNAS LIYFQHALKL DILGQTKISG ILRAMVLPSY PEHKLFLGFP SETVAFNIKE 420
  421 DFQLELDPSL STKERTIALS GTNGEFVQVT STFLCIYDSA KRSRLVYIEK ITNAACYQEY 480
  481 SAIVINGTAL AIFKKDTEVA RKVFESEISC LDFSAQFQIG VGFWSKQVMI LTFSDNSSIS 540
  541 CAFQTNVPSL PRNIILEGVG VDRNLLLVSS GSGEFKSYVL FKNNLVFSET KHFGTTPVSF 600
  601 RRFTMNIGTY IICNNDCPHM VYGFNGALCY MPLSMPQSYD VCQFRDNSGK DFLISVSLGG 660
  661 LKFLQLNPLP ELTPRKVLLE HVPLQAIIFQ NKLLLRTLEN RYEDYESYKE NYHLELVDSY 720
  721 DDNSFRVFSF TENERCEKVL KINESSLLVG TSIIEQDKLV PVNGRLILLE FEKELQSLKV 780
  781 VSSMVLSAAV IDLGVYNDRY IVAFGQQVAI VKLTEERLMI DSRISLGSIV LQLIVEGNEI 840
  841 AIADSIGRFT IMYFDGQKFI VVARYLFGEN IVKAALYEGT VYIIATNSGL LKLLRYNKDA 900
  901 KNFNDRFICE SVYHLHDKVS KFQNFPITNT NSFLEPKMLF ATEIGAIGSI VSLKDKELEL 960
  961 EELTRKIRKL KFSYLSSMDY ESIEADLISP VPFIDGDLVI DVKRWASSEL FRLCRSVEHR1020
 1021 ESLNSYQKVQ ALLEEIQSLC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1040] PSI-BLAST 1000.0 Crystal Structure of DDB1 In Complex with Simian Virus 5 V Protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle