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Protein Overview: rhp41

General Information:
Name(s) found: rhp41 / SPAC12B10.12c [Sanger Pombe]
Description(s) found:
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  • gi|7492535|pir||T37579 probable dna repair protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19115556|ref|NP_594644.1| DNA repair protein Rhp41 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1723554|sp|Q10445.1|RHP41_SCHPO RecName: Full=DNA repair protein rhp41 [NCBI NR]
  • gi|1262425|emb|CAA94702.1| DNA repair protein Rhp41 [Schizosaccharomyces pombe] [NCBI NR]
  • DNA repair protein Rhp41 [Sanger Pombe]
  • DNA repair protein rhp41 OS=Schizosaccharomyces pombe GN=rhp41 PE=2 SV=1 [Swiss-Prot]
  • (Q10445) DNA repair protein rhp41 [Swiss-Prot]
  • NUCLEOTIDE-EXCISION REPAIR PROTEIN; SIMILAR TO S. CEREVISIAE RAD4: Q10445; [pompepVF.fasta]
  • NUCLEOTIDE-EXCISION REPAIR PROTEIN: Q10445; [pompepV13]
  • DNA repair protein rhp41 [pompep4896]
  • |rhp41|rhp4a|involved in nucleotide-excision repair [pompepnew.fasta]
  • |rhp41|rhp4a|involved in DNA repair (PMID 12807767)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative dna repair protein [Schizosaccharomyces pombe]gi|1262425|emb|CAA94702.1| SPAC12B10.12c [Schizosaccharomyces pombe]gi|1723554|sp|Q10445|RH41_SCHPO DNA repair protein rhp41gi|7492535|pir||T37579 probable dna repair protein - fission yeast (Schi [nrdb_11152004_Chlamydomonas]
  • |rhp41|rhp4a|involved in DNA repair |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • |rhp41|rhp4a|DNA repair protein Rhp41|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC12B10.12c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC12B10.12c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp41 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 638 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleotide-excision repair complex [ISSLink to PubMed article]
    spindle [IDALink to PubMed article]
    Biological Process: nucleotide-excision repair [IGILink to PubMed article]
    mismatch repair [IGILink to PubMed article]
    Molecular Function: DNA binding [IEA]
    damaged DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSDEDNTYS DDEEWLDLDL GLPNNDIKTA PILNSSLLSS AVHGERLIQE RPTHDFGDVE  60
   61 ATVDRTVEKR SRLKITSVDR KIRLQIHQLH LLCLTYHLCT RNTWCDDNRL NYLVKYIPPG 120
  121 IRVSLHPSSQ KSQMIRNKTF LHGLAGLVEV WKRKYKITTN GLRKPNYGLL QNNSLISESL 180
  181 SLEEFCKNSK LLSGSRDYGT QLFASILRNL NVPTRLVFSL QVLSFRFKGA INEASSHEIV 240
  241 PAWSQQMEND SSSDISESAH ITSRFRKRRK IIQPSFSNLS HLDASDIVTE DTKLKVIDSP 300
  301 KPVFWVEAFN KAMQKWVCVD PFGDASVIGK YRRFEPASSD HLNQMTYVFA IEANGYVKDV 360
  361 TRKYCLHYYK ILKNRVEIFP FGKAWMNRIF SKIGKPRDFY NDMDAIEDAE LLRLEQSEGI 420
  421 PRNIQDLKDH PLFVLERHLK KNQAIKTGKS CGRINTKNGV ELVYPRKYVS NGFSAEHWYR 480
  481 KGRIIKPGAQ PLKHVKNGDK VLPLYDEEAT QLYTPKPVVA NIVPKNAYGN IDLYVPSMLP 540
  541 YGAYHCRKRC ALAAAKFLEI DYAKAVVGFD FQRKYSKPKL EGVVVSKRYE EAIDLIAEEI 600
  601 DQEEKEAEAR NVRKTCLLLW KRLITGLRIR QRVFEEYG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..638] PSI-BLAST 132.0 No description for 2qshA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle