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Protein Overview: rhp18

General Information:
Name(s) found: rhp18 / SPBC1734.06 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • Rad18 homolog Rhp18 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromatin [ICLink to PubMed article]
    Biological Process: DNA damage checkpoint [IMPLink to PubMed article]
    proteasome localization [IMPLink to PubMed article]
    postreplication repair [IMPLink to PubMed article]
    protein ubiquitination [IMPLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [TASLink to PubMed article]
    DNA binding [IEA]
    zinc ion binding [IEA]
    damaged DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNELDATDPS DWNQTKIPSL KGLDSSLRCL ICHEYFRAPL ITSCSHTFCS FCIRDYLREH  60
   61 PMCPACRAPE QESRLRKNTI LEEILESFKV IRPTLFEFLK VENVPKPVLQ APETVIAQDS 120
  121 ASGDEEWEDD LASNSSPASI AKKTSRDSKK RKREDLVHCP ACSNLVPHNQ INQHLDSCLN 180
  181 SPSSPSSSSS PYKNKDNSKS NSLLSFKTDD DSITKRRLRS FNSADELPLK DRVRLPKLTY 240
  241 ALLSESKIRS KLSEMGLPTD GHKQLLQRRH AKWVTLYNSN LDQKQPVSKR NLIRQLIDWE 300
  301 RVQSKSIGVE KEKLGGGDWE KAYAEDFADL INRAKQSTTN KNDSLRNTAV ESSTEPSTSN 360
  361 GFPATSVSPP LTIDLTNSQT GSDGPQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 9.221849 No description for 2cklA was found.
    2 View Details [150..387] MSA 2.616996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle