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Protein Overview: rcd1

General Information:
Name(s) found: rcd1 / SPAC29B12.06c [Sanger Pombe]
Description(s) found:
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  • gi|26398705|sp|Q92368.1|RCD1_SCHPO RecName: Full=Cell differentiation protein rcd1 [NCBI NR]
  • gi|2408048|emb|CAB16251.1| RNA-binding protein, CCR4-NOT complex subunit Rcd1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115896|ref|NP_594984.1| RNA-binding protein Rcd1 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1620896|dbj|BAA13507.1| unnamed protein product [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T43247 rcd1 protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • RNA-binding protein Rcd1 [Sanger Pombe]
  • Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1 [Swiss-Prot]
  • CELL DIFFERENTIATION PROTEIN RCD1P: Q92368; [pompepVF.fasta]
  • Cell differentiation protein rcd1 [pompep4896]
  • |rcd1||cell differentiation protein [pompepnew.fasta]
  • |rcd1||RNA-binding protein (PMID 9671458)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • |rcd1||RNA-binding protein |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • cell differentiation protein Rcd1p [Schizosaccharomyces pombe]gi|2408048|emb|CAB16251.1| SPAC29B12.06c [Schizosaccharomyces pombe]gi|26398705|sp|Q92368|RCD1_SCHPO Cell differentiation protein rcd1gi|11288429|pir||T43247 rcd1 protein - fission yeast (Sc [nrdb_11152004_Chlamydomonas]
  • (Q92368) Cell differentiation protein rcd1 [pompep4896_normal_reversed]
  • |rcd1||RNA-binding protein, CCR4-NOT complex subunit Rcd1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC29B12.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • unnamed protein product [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPAC29B12.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rcd1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    CCR4-NOT complex [ISSLink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    negative regulation of induction of conjugation with cellular fusion [IMPLink to PubMed article]
    RNA elongation [IC]
    mRNA catabolic process [ICLink to PubMed article]
    negative regulation of conjugation with cellular fusion [IGILink to PubMed article]
    Molecular Function: RNA binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENLESPNYE PALVYEWIIQ LVSGTSREQA LVELSRKREQ YEDLALILWH SYGVMTALLQ  60
   61 EIISVYPLLN PPTLTGPTSN RVCNALALLQ CIASHPETRI HFLNAHITLF LYPFLNTLSK 120
  121 SKPFEYLRLT SLGVIGALVK NDSPEVINFL LSTEIIPLCL RIMENGSELS KTVAIFIVQK 180
  181 FLCDDVGLQY ICQTYERFYA VASVLNNMVM QLVDSFAFRL LKHVIRCYLR LSDNPRAREA 240
  241 LRHCLPEPLR DATFAQVLKD DHNTKKCLAQ LLINLSDVAV VNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 135.0 No description for 2fv2A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle