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Protein Overview: rae1

General Information:
Name(s) found: rae1 / SPBC16A3.05c [Sanger Pombe]
Description(s) found:
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  • gi|625094|gb|AAA86311.1| polyA+ RNA export [NCBI NR]
  • gi|2842504|emb|CAA16856.1| RNA export factor Rae1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113576|ref|NP_596784.1| RNA export factor Rae1 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||A56119 RNA export protein rae1 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|1172829|sp|P41838.1|RAE1_SCHPO RecName: Full=Poly(A)+ RNA export protein [NCBI NR]
  • RNA export factor Rae1 [Sanger Pombe]
  • Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe GN=rae1 PE=1 SV=1 [Swiss-Prot]
  • POLY(A)+ RNA EXPORT PROTEIN.: P41838; [pompepVF.fasta]
  • Poly(A)+ RNA export protein [pompep4896]
  • |rae1||WD repeat protein [pompepnew.fasta]
  • |rae1||WD repeat protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • poly(a)+ rna export protein. [Schizosaccharomyces pombe]gi|2842504|emb|CAA16856.1| rae1 [Schizosaccharomyces pombe]gi|1172829|sp|P41838|RAE1_SCHPO Poly(A)+ RNA export proteingi|1362233|pir||A56119 RNA export protein rae1 - fission yeast (Schizosaccharo [nrdb_11152004_Chlamydomonas]
  • (P41838) Poly(A)+ RNA export protein [pompep4896_normal_reversed]
  • |rae1||RNA export factor Rae1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC16A3.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • polyA+ RNA export [nr-271106-contam.fasta]
  • hypothetical protein SPBC16A3.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |rae1|cut21|RNA export factor, nucleoporin Rae1|Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rae1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nuclear pore [ISSLink to PubMed article]
    Biological Process: [NOT]mitotic cell cycle spindle assembly checkpoint [IMPLink to PubMed article]
    ribosomal subunit export from nucleus [ISS]
    protein import into nucleus [TASLink to PubMed article]
    poly(A)+ mRNA export from nucleus [IMPLink to PubMed article]
    regulation of G2/M transition of mitotic cell cycle [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFGQATTS TVSNATGDLK KDVEVAQPPE DSISDLAFSP QAEYLAASSW DSKVRIYEVQ  60
   61 ATGQSIGKAL YEHQGPVLSV NWSRDGTKVA SGSVDKSAKV FDIQTGQNQQ VAAHDDAVRC 120
  121 VRFVEAMGTS PILATGSWDK TLKYWDLRQS TPIATVSLPE RVYAMDCVHP LLTVATAERN 180
  181 ICVINLSEPT KIFKLAMSPL KFQTRSLACF IKGDGYAIGS VEGRCAIQNI DEKNASQNFS 240
  241 FRCHRNQAGN SADVYSVNSI AFHPQYGTFS TAGSDGTFSF WDKDSHQRLK SYPNVGGTIS 300
  301 CSTFNRTGDI FAYAISYDWS KGYTFNNAQL PNKIMLHPVP QDEIKPRPKK GR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 64.30103 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle