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Protein Overview: rad4

General Information:
Name(s) found: rad4 / SPAC23C4.18c [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • BRCT domain protein Rad4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    DNA replication preinitiation complex [ISS]
    spindle pole body [IDALink to PubMed article]
    nuclear replication fork [ISSLink to PubMed article]
    spindle [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA replication preinitiation complex assembly [IMPLink to PubMed article]
    DNA damage checkpoint [IMPLink to PubMed article]
    DNA replication initiation [ISSLink to PubMed article]
    DNA replication checkpoint [TASLink to PubMed article]
    S-M checkpoint [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSKPLKGF VICCTSIDLK QRTEISTKAT KLGAAYRSDF TKDVTHLIAG DFDTPKYKFA  60
   61 AKSRPDIKIM SSEWIPVLYE SWVQGEDLDD GLLVDKHFLP TLFKCRVCLT NIGQPERSRI 120
  121 ENYVLKHGGT FCPDLTRDVT HLIAGTSSGR KYEYALKWKI NVVCVEWLWQ SIQRNAVLEP 180
  181 QYFQLDMPAE KIGLGAYVRL DPNTTEAKSY SENQKISKNK EKSGQSLAAL AEEADLEPVI 240
  241 MKRGKKRDRS ILWEELNNGK FEFSSRSEEN SVLLDDFTPE TVQPLEENEL DTELNIENEA 300
  301 KLFKNLTFYL YEFPNTKVSR LHKCLSDNGG QISEFLSSTI DFVVIPHYFP VDELPIFSFP 360
  361 TVNEWWIERC LYYKKIFGID EHALAKPFFR PSLVPYFNGL SIHLTGFKGE ELSHLKKALT 420
  421 ILGAVVHEFL GVQRSILLVN TNEPFSMKTR FKIQHATEWN VRVVGVAWLW NIIQSGKFID 480
  481 QVSPWAIDKK ENQEIKKFTN QNNMVFPTSD RDTRLQNSLA QQPIGHSTPH NSPSLLSVKK 540
  541 RQNNHIRSNT LIQLNSNSKD STIFPRRSVT VPGDKIDTVW KSSVTKPETP TSPQEHVSYI 600
  601 DPDAQREKHK LYAQLTSNVD AIPPANDLQN QENGLLLITE SHRKLRRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 39.522879 No description for 2owoA was found.
    2 View Details [87..384] PSI-BLAST 12.69897 Co-Crystal Structure of Lif1p-Lig4p
    3 View Details [385..491] PSI-BLAST 31.30103 Breast cancer associated protein, BRCA1
    4 View Details [492..648] MSA 1.13899 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle