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Protein Overview: psi1

General Information:
Name(s) found: psi1 / SPCC830.07c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • DNAJ domain protein Psi1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosolic small ribosomal subunit [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to heat [IEPLink to PubMed article]
    translational initiation [ISSLink to PubMed article]
    protein folding [IEA]
    Molecular Function: unfolded protein binding [ISSLink to PubMed article]
    Hsp70 protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVADTKLYDC LEVRPEASEA ELKKAYRKLA LKYHPDKNPN GEKKFKEISL AYEVLSDPQR  60
   61 RKLYDQYGIT EGNAAPPPPG AEGGPGAGFG GFPGAGPGGA RTFHFNMGGP GGAQFFSASD 120
  121 PNDIFERVFG HAFAGGGGMG GGMGGMGGMD DDMDMDGGFG TRTRGGGMPG GFANMFGGGG 180
  181 AGPHARRSHP SFGGSRPSQP PAQNEVITRP LNVSLEDLFT GCTKKMKISR HIIDASGQSV 240
  241 KADRILEIKV KPGWKAGTKI KFAGEGDEKP DGTVQDIQFV LAEKPHPVFT RSGDDLRMQV 300
  301 ELSLKEALLG FSKQISTIDG KKLKVSSSLP TQPGYEITYP GFGMPLPKNP SQRGNMIIEC 360
  361 KVKFPTELTP AQKTAAEAF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 24.39794 No description for 2o37A was found.
    2 View Details [132..379] PSI-BLAST 47.39794 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.13705208493215 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.3925478652468 bayes_pls_golite062009
  • protein binding
    		•  1.32690171510656 bayes_pls_golite062009
  • catalytic activity
    		•  0.276917867171685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle