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Protein Overview: rpt1

General Information:
Name(s) found: rpt1 / SPBC16C6.07c [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • 19S proteasome regulatory subunit Rpt1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 438 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    proteasome regulatory particle, base subcomplex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of cell cycle [RCALink to PubMed article]
    mitotic cell cycle [IC]
    ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [ISSLink to PubMed article]
    endopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKEDWEKY QKPVDTEEEN DKNPPPLDEG DIELLKSYAT GPYARELAAI KEDTEAVLKR  60
   61 INDTVGIKES DTGLAPISFW DVAADRQRMS EEQPLQVARC TKIIENEQSA EKNAYVINLK 120
  121 QIAKFVVSLG ERVSPTDIEE GMRVGCDRNK YAIQLPLPPK IDPSVTMMQV EEKPDVTYGD 180
  181 VGGCKEQIER LREVVELPLL SPERFVKLGI DPPKGIMLYG PPGTGKTLCA RAVANRTDAT 240
  241 FIRVIGSELV QKYVGEGARM VRELFEMART KKACIIFFDE IDAIGGARFD DGAGGDNEVQ 300
  301 RTMLELITQL DGFDPRGNIK VLFATNRPNT LDEALMRPGR IDRKVEFGLP DLEGRAHILR 360
  361 IHAKSMAIDK DIRWELIARL CPSQTGAELR SVCTEAGMFA IRARRRVATE KDFLDAVQKV 420
  421 VKGNQKFSST ADYMNMSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..438] PSI-BLAST 72.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle