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Protein Overview: pop1

General Information:
Name(s) found: pop1 / SPBC1718.01 [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • F-box/WD repeat protein Pop1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 775 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    SCF ubiquitin ligase complex [IDALink to PubMed article]
    Biological Process: cyclin catabolic process [IMPLink to PubMed article]
    conjugation with cellular fusion [IMPLink to PubMed article]
    regulation of mitotic cell cycle [IC]
    cellular response to nitrogen starvation [IGILink to PubMed article]
    ubiquitin-dependent protein catabolic process [IMPLink to PubMed article]
    Molecular Function: identical protein binding [IPILink to PubMed article]
    protein binding [IPILink to PubMed articleLink to PubMed articleLink to PubMed article]
    protein binding, bridging [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKKKDSLS VLDSNEFFGE TTMVSPSIDV SSSPRPNVER FSPCSTKKDL LEGNNIMTRI  60
   61 PEELSRVSLQ FDSKGSQQSM IFTNNRCLSD KENLENLQNL LYLHCDLNRP HLSCELPSEH 120
  121 REKCLKRRNS SLSSNLHANK RFLFNSQSDG NKKNETFPST NYSNVFYPNN CDSKEVASET 180
  181 TFSLDAPNNS VNYSYFSPNL LGNDSKTRQS FPPHSSSSSH NSLHEPVIYD FSSENPSIHP 240
  241 SNHLSSQKNA VLKLAQLISS FEKLPESVRQ YLLFHLLSRC GKHAVQNIHK ILLPIFQKNF 300
  301 LTGFPAEITN LVLTHLDAPS LCAVSQVSHH WYKLVSSNEE LWKSLFLKDG FFWDSIDSKI 360
  361 RTMCLEQSLS ACAIMKRVYF RHFNLRERWL HAPEKIKRCS FPIHGVRLIT KLQFDDDKII 420
  421 VSTCSPRINI YDTKTGVLIR SLEEHEGDVW TFEYVGDTLV TGSTDRTVRV WDLRTGECKQ 480
  481 VFYGHTSTIR CIKIVQGNQS TTDTDDVEKE NRPASNDANS MPPYIISSSR DCTIRLWSLP 540
  541 CLDDPPFVNV NENPDQNNDF TSATTNPFYI RTLRGHTDSV REVACLGDLI VSASYDGTLR 600
  601 VWKASTGVCL HVLRGHVGRV YSVTINPSRQ QCISAGTDAK IRIWNLESGE LLQTLHGHSN 660
  661 LVSQVTFNQN ILVSASAPPD TSLRVWDLNT GSCRDILKCP LGHIFFQHDE SKVVSGSHST 720
  721 LQLWDIRSGK LVRDLLTDLD IIWQVAYNEN VCVAAVLRNN RFWIEVLEFG STKSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] deduced N/A No confident structure predictions are available.
    2 View Details [186..280] PSI-BLAST 6.09691 TolB, C-terminal domain; TolB, N-terminal domain
    3 View Details [281..775] PSI-BLAST 71.39794 Cdc4 F-box and linker domains; Cdc4 propeller domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle