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Protein Overview: php2

General Information:
Name(s) found: php2 / SPBC725.11c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • CCAAT-binding factor complex subunit Php2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: CCAAT-binding factor complex [ISSLink to PubMed article]
    nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: regulation of carbohydrate metabolic process [ISSLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter in response to iron ion starvation [IMPLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: transcription factor activity [NASLink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    sequence-specific DNA binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPYEPVEGL YVNAKQYHRI LKRREARAKL EERLRGVQTT KKPYLHESRH KHAMRRPRGP  60
   61 GGRFLTADKV SKLRAQEAAE AAANGGSTGD DVNATNANDA TVPATVSSEV THTSEGYADS 120
  121 NDSRPSSISN SSESPAPINS ATASMSPANN TSGNNITSPN VRGELDMSGN IAMSGGPTNT 180
  181 ASTSGPVPHD MTVLPQTDSN TSNLMSSGSQ LGSFATASTN GNNSTTTTTS SAAHPGSFHK 240
  241 GTNDYSSTLA GNEHSAFPGL DVYHDDSVSA GAAFIPHNPM DSIDHLDVND PTATGLPVLP 300
  301 ASDIDPLNLT GNTQDSMIIG QQTYPSHGSS GTMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] Pfam 31.124939 No description for PF02045.5 was found. No confident structure predictions are available.
    2 View Details [117..334] MSA 5.067996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle