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View Structure Prediction Details

Protein: php2
Organism: Schizosaccharomyces pombe
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for php2.

Description E-value Query
Range
Subject
Range
gi|70871429 - gi|70871429|gb|EAN85580.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71410253 - gi|71410253|ref|XP_807431.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
167.0 [0..67] [304..667]
gi|840706 - gi|840706|dbj|BAA09333.1| trans-sialidase [Trypanosoma cruzi]
166.0 [0..52] [305..674]
gi|8778470 - gi|8778470|gb|AAF79478.1|AC022492_22 F1L3.29 [Arabidopsis thaliana]
158.0 [0..6] [159..197]
gi|17231151, gi|... - gi|17231151|ref|NP_487699.1| hypothetical protein alr3659 [Nostoc sp. PCC 7120], gi|17132792|dbj|BAB...
gi|25531679 - pir||AD2263 hypothetical protein alr3659 [imported] - Nostoc sp. (strain PCC 7120)
153.0 [0..70] [320..84]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPYEPVEGL YVNAKQYHRI LKRREARAKL EERLRGVQTT KKPYLHESRH KHAMRRPRGP  60
   61 GGRFLTADKV SKLRAQEAAE AAANGGSTGD DVNATNANDA TVPATVSSEV THTSEG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.124939
Match: PF02045.5
Description: No description for PF02045.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YADSNDSRPS SISNSSESPA PINSATASMS PANNTSGNNI TSPNVRGELD MSGNIAMSGG  60
   61 PTNTASTSGP VPHDMTVLPQ TDSNTSNLMS SGSQLGSFAT ASTNGNNSTT TTTSSAAHPG 120
  121 SFHKGTNDYS STLAGNEHSA FPGLDVYHDD SVSAGAAFIP HNPMDSIDHL DVNDPTATGL 180
  181 PVLPASDIDP LNLTGNTQDS MIIGQQTYPS HGSSGTMK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle