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Protein Overview: ppp1

General Information:
Name(s) found: ppp1 / SPBC19F5.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • pescadillo-family BRCT domain protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    nucleoplasm [IEA]
    Biological Process: ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVKQKGKA GAARIYITRN QALKKLQLTL ADFRRICILK GVYPREPKNK KKANKGSTAP  60
   61 VTFYYTKDIQ YLLHEPIVQK FREYKVFARK LSKALGKGEL ETAKRLEARK PTYSLDHIIK 120
  121 ERYPTFHDAL KDIDDALSML FLFSTMPVTD KIGAATVANC ERLCAEFQHY VIRSNSLRKA 180
  181 FLSIKGIYYQ AEIFGEQITW IVPYKFAQSV PTDVDFRIMH TFLEFYQALM GFVNFKLYNT 240
  241 LGLRYPPKID VAKSESAAGL AAYELEESSS LPAIVHGNNK NARKNIATLK SKIRDIVNSD 300
  301 ANVVEQSEKT TEDADEEPET EENLDEFKPA DGADNEDSKS LVSHISSSNT SLFSNFTFFL 360
  361 SREVPRFSLE FVIRAFGGKV GWDPILGSGS PFSESDPVIT HHICDRPHIS QKYEGRIYIQ 420
  421 PQWVYDSINK GILERTDLYA CGATLPPHLS PFVKVGENDY DPEAELSAEE NDDVSEALDD 480
  481 NISGEAVPIS KKNDEPENVE QIDDAEEEDL EHQRELEAEA GGVAYSEYVK QNSKSAKKTK 540
  541 KRQRDTLTAE EKEEKEAKEL SKMMMSNKQR KLYSKLKNEN SKNENYNNAL RNRKRDIEKR 600
  601 KKLKVEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] MSA 2.021949 View MSA. No confident structure predictions are available.
    2 View Details [194..272] deduced N/A No confident structure predictions are available.
    3 View Details [273..607] PSI-BLAST 7.045757 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle