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Protein Overview: nif1

General Information:
Name(s) found: nif1 / SPBC23G7.04c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SEL1 repear protein Nif1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 681 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: negative regulation of G2/M transition of mitotic cell cycle [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METMQSRTYA GLTKLNTTTA LLNKKDGNDD DKAEHSKRSG YHGLSPLDAL ALKHRDLNRK  60
   61 LNLRAMMSKS EDNLQILKET TSGSSSDLLN IESPASPAEA SSPFTVRTPT VHDPEHYFVA 120
  121 QKLSSVFGTP DLEDETDFFD YFSAAPDVHP NDIFDSYNSN NIAESFDDDN YYNSLLPPNA 180
  181 PYYHEIEPPR TASNTSPTPN SIKSAHPAEP PKRPAFTRSA TSPDKILPTR IKSKDTVSSG 240
  241 DSTPLSGSSS SKGMLMSMST SENHSLSSNP ELSNSNLLAK NESPADVSNN ESGNESSKEP 300
  301 DKEHSTPIHP TTPVSRCARP SSRQQTISIL QAQSPFLKKS DKERANLNKT MVSINKSINI 360
  361 HQSIHEISCP HHSSSDNCLF ILISLMDRLH SPVLKQLDVS LQSLTMTAIR YIDLNYVDVQ 420
  421 YTNLRGGAYG NGNNSESSDN AQLKKEEHLN LAIHFHLLND HDKCFWHTGM ASSYEDYTAT 480
  481 FIYGLYLRHG LACSPKTHVS FLFLLKTATQ LLNKLVECLH SSDLGLNDTT PNEKLSTEYN 540
  541 QQRLLLALIL YELGVCFMHG WGITRDRYLA LHLIKLSGAW GDADAQFEAG LQMSLGAVSD 600
  601 KDSHMAAYYY RLAGFQGISP PSKCKWVYKS KYSLAANHKV PAASEVAYVS AIVENLESHS 660
  661 LKFSTKPKAK LRSLITSVRY L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] deduced N/A No confident structure predictions are available.
    2 View Details [131..338] MSA 1.091994 View MSA. No confident structure predictions are available.
    3 View Details [339..432] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [433..681] PSI-BLAST 63.045757 Helicobacter cysteine rich protein C (HcpC)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle