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Protein Overview: nup45

General Information:
Name(s) found: nup45 / SPAC22G7.09c [Sanger Pombe]
Description(s) found:
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  • gi|7492772|pir||T11619 probable nucleoporin - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4581471|emb|CAA91133.2| nucleoporin Nup45 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113970|ref|NP_593058.1| nucleoporin Nup45 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|18275660|sp|Q09793.2|NUP45_SCHPO RecName: Full=Nucleoporin nup45; AltName: Full=Nuclear pore protein nup45 [NCBI NR]
  • nucleoporin Nup45 [Sanger Pombe]
  • Nucleoporin nup45 OS=Schizosaccharomyces pombe GN=nup45 PE=1 SV=2 [Swiss-Prot]
  • Putative nucleoporin C22G7.09c - Schizosaccharomyces pombe (Fission yeast) [Swiss-Prot]
  • PUTATIVE NUCLEOPORIN; PUTATIVE NUCLEAR PORE COMPONENT; SIMILAR TO S. CEREVISIAE NUP49: Q09793; [pompepVF.fasta]
  • PUTATIVE NUCLEOPORIN: Q09793; [pompepV13]
  • Putative nucleoporin C22G7.09c [pompep4896]
  • |||nucleoporin [pompepnew.fasta]
  • |||nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative nucleoporin [Schizosaccharomyces pombe]gi|4581471|emb|CAA91133.2| SPAC22G7.09c [Schizosaccharomyces pombe]gi|18275660|sp|Q09793|NG79_SCHPO Putative nucleoporin C22G7.09cgi|7492772|pir||T11619 probable nucleoporin - fission yeast (Schizosacchar [nrdb_11152004_Chlamydomonas]
  • |nup45||nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q09793) Putative nucleoporin C22G7.09c [pompep4896_normal_reversed]
  • |nup45||nucleoporin Nup45|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC22G7.09c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC22G7.09c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Nucleoporin nup45 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nup45 PE=1 SV=2 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear membrane [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    nuclear pore [TASLink to PubMed article]
    Biological Process: cell division [IMPLink to PubMed article]
    nucleocytoplasmic transport [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLNKTPSF GSTGTQNQNT GTSAGTGLFS SNTFGNNTQA NTPASTGFGG VTGGAFGQTK  60
   61 PQTGGSLFGN KPNATSTTPG LNLFGQNPQA APGGSLFGAS TTKPQAPGGL FNQNQTQAQP 120
  121 AQAAPTGGLF GLSGQNQTQS QTQPAQANTS LFGQSNIGTT GGLFDQNRPN TSTFGQFSTQ 180
  181 PASAGLFGQS TQPSGSTGFG LSNNTQTTPF FSAAQQQPST TQLPSNPAIN ATTRYSSLNA 240
  241 NTQKFLDDLD KEIFSQIQLA EELQTKLGTV SELVESVPND VAEVQRRLSS VSTALLIDSD 300
  301 EIETTKRVVD EDTSNARISS RILDVFKTPG ATYPFASNDP LMNYFEQFTE NAKKRTDLYA 360
  361 ATIGELEQHL EQVETTPQNN SPEALLKTIK EEHKLFMALS NRFAQVHDEV KRLQVNTSTS 420
  421 LPFIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] MSA 7.252996 View MSA. No confident structure predictions are available.
    2 View Details [186..425] PSI-BLAST 14.39794 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle