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Protein Overview: ned1

General Information:
Name(s) found: ned1 / SPAC1952.13 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • lipin [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    [NOT]nucleocytoplasmic transport [IMPLink to PubMed article]
    nuclear envelope organization [ISSLink to PubMed article]
    chromosome organization [IMPLink to PubMed article]
    phospholipid biosynthetic process [ISSLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    endoplasmic reticulum organization [IMPLink to PubMed article]
    dephosphorylation [ICLink to PubMed article]
    nucleus organization [IMPLink to PubMed article]
    Molecular Function: magnesium ion binding [ISSLink to PubMed article]
    phosphatidate phosphatase activity [ISSLink to PubMed article]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYVGRAFDS VTKTWNAINP STLSGAIDVI VVEQEDKTLA CSPFHVRFGK FSLLLPSDKK  60
   61 VEFSVNGQLT GFNMKLGDGG EAFFVFATEN AVPRELQTSP IVSPTTSPKQ TPSINVTEPQ 120
  121 DLELDKVSQD HEKDQSNTYL MEDGYEFPLT RDLIRRSKSD ADQTPPTGFK HLRHSSCLEM 180
  181 AGSDRTPSMP ATTLADLRLL QKAKELGKRL SGKELPTRVG DNGDVMLDMT GYKSSAANIN 240
  241 IAELARETFK DEFPMIEKLL REDEEGNLWF HASEDAKKFA EVYGHSPPAS PSRTPASPKS 300
  301 DSALMDEDSD LSRRHSLSEQ SLSPVSESYP QYAKTLRLTS DQLRSLNLKP GKNELSFGVN 360
  361 GGKAICTANL FFWKHNDPVV ISDIDGTITK SDALGHMFTL IGKDWTHAGV AKLYTDITNN 420
  421 GYKIMYLTSR SVGQADSTRH YLRNIEQNGY SLPDGPVILS PDRTMAALHR EVILRKPEVF 480
  481 KMACLRDLCN IFALPVPRTP FYAGFGNRIT DAISYNHVRV PPTRIFTINS AGEVHIELLQ 540
  541 RSGHRSSYVY MNELVDHFFP PIEVSTRDEV SSFTDVNFWR SPLLELSDEE EDDTNKSTSK 600
  601 SPKTPKNTKF GYQEFEGIDE EDAQDYSPSP LIKSFNELMF EGEEDEEGEE DVENAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] Pfam 68.408935 No description for PF04571.5 was found. Confident ab initio structure predictions are available.
    2 View Details [101..273] deduced N/A No confident structure predictions are available.
    3 View Details [274..656] FFAS03 1.24 No description for 2hlkA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle