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Protein Overview: sam1

General Information:
Name(s) found: sam1 / SPBC14F5.05c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • S-adenosylmethionine synthetase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 382 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: one-carbon metabolic process [IEA]
    methionine metabolic process [IGILink to PubMed article]
    Molecular Function: magnesium ion binding [IEA]
    ATP binding [ISSLink to PubMed article]
    potassium ion binding [IEA]
    methionine adenosyltransferase activity [IGILink to PubMed article]
    cobalt ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTFLFTSE SVGEGHPDKI CDQISDAILD ACLKDDPFSK VACETASKTG MVMVFGEITT  60
   61 RSQIDYQKVI RNTIKSIGYD DSEKGFDYKT CNVLVAIEQQ SPDIAQGLHY EKALEELGAG 120
  121 DQGIMFGYAT DETPEKLPLT ILLAHKLNAA MSVARRDGSL PWLRPDTKTQ VTIEYEEENG 180
  181 AVIPRRVDTI VVSAQHADSI STEDLRSEIL EKIIKPTVPA HLLDEKTVYH IQPSGRFVVG 240
  241 GPQGDAGLTG RKIIVDTYGG WGAHGGGAFS GKDYSKVDRS AAYAARWIAK SLVAAGLARR 300
  301 CLVQLSYAIG VAEPLSIFVN TYGTSSKTSA ELVEIIRKNF DLRPGVLVKS LKLQTPFYLS 360
  361 TASYGHFTDQ SKPWEQPKEL KF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 1000.0 No description for 2p02A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methionine adenosyltransferase activity
    		•  8.00759843092519 bayes_pls_golite062009
  • transferase activity
    		•  1.78879119839291 bayes_pls_golite062009
  • binding
    		•  1.70779292877479 bayes_pls_golite062009
  • catalytic activity
    		•  1.59111295908728 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.11999094477144 bayes_pls_golite062009
  • protein binding
    		•  0.298204436433395 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle