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Protein Overview: ckb1

General Information:
Name(s) found: ckb1 / SPAC1851.03 [Sanger Pombe]
Description(s) found:
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  • gi|6562196|emb|CAB62429.1| CK2 family regulatory subunit Ckb1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19859294|sp|P40232.2|CSK2B_SCHPO RecName: Full=Casein kinase II subunit beta; Short=CK II beta [NCBI NR]
  • gi|19115518|ref|NP_594606.1| CK2 family regulatory subunit [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50126 casein kinase II beta chain [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • CK2 family regulatory subunit [Sanger Pombe]
  • (P40232) Casein kinase II beta subunit (CK II beta) [Swiss-Prot]
  • Casein kinase II subunit beta OS=Schizosaccharomyces pombe GN=ckb1 PE=2 SV=2 [Swiss-Prot]
  • CASEIN KINASE II BETA CHAIN: P40232;Q9US19; [pompepVF.fasta]
  • Casein kinase II beta chain (CK II) [pompep4896]
  • |ckb1||casein kinase II beta chain (PMID 8264625) [pompepnew.fasta]
  • Casein kinase II beta subunit (CK II beta) [4896.FASTAC]
  • |ckb1||protein kinase CK2 complex (beta subunit) (regulatory subunit) (PMID 8264625)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • casein kinase II beta chain [Schizosaccharomyces pombe]gi|6562196|emb|CAB62429.1| ckb1 [Schizosaccharomyces pombe]gi|11280588|pir||T50126 casein kinase II beta chain [imported] - fission yeast (Schizosaccharomyces pombe)gi|19859294|sp|P40232|KC2B_SCHP [nrdb_11152004_Chlamydomonas]
  • |ckb1||CK2 family |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (P40232) Casein kinase II beta chain (CK II) [pompep4896_normal_reversed]
  • |ckb1||CK2 family regulatory subunit Ckb1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC1851.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Casein kinase II subunit beta (CK II beta) [nr-271106-contam.fasta]
  • hypothetical protein SPAC1851.03 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Casein kinase II subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ckb1 PE=2 SV=2 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    protein kinase CK2 complex [ISSLink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    Biological Process: biological regulation [RCA]
    transcription from RNA polymerase III promoter [ISSLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    protein amino acid phosphorylation [ISSLink to PubMed article]
    regulation of phosphorylation [ICLink to PubMed article]
    Molecular Function: protein kinase regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYSSESES DDSQYWVDWF LGLKGNEFFC EVDEDFIQDR FNLTGLSHEV PHYSQSLDLI  60
   61 LDVLDPDLPE EVQDEVEASA RHLYGLIHAR YILTAQGLYK MLEKYKKCDF GHCPRVLCNG 120
  121 QPMLPVGLSD IAHTKSVKLY CPRCEDVYTP KSQRHASIDG AYFGTSFPHM LFQVYPELAV 180
  181 PKSQERYIPR IFGFKVHSYS ATFKKQDVYK EKQKKRLQGA EAESKNKLAI T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 106.0 Casein kinase II beta subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein kinase regulator activity
    		•  4.14878012076359 bayes_pls_golite062009
  • kinase regulator activity
    		•  4.09603095102334 bayes_pls_golite062009
  • enzyme regulator activity
    		•  2.91779610785511 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.79245883940915 bayes_pls_golite062009
  • protein kinase activity
    		•  2.75473427458132 bayes_pls_golite062009
  • kinase activity
    		•  2.66515798949431 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.39333807060713 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  1.99491617326192 bayes_pls_golite062009
  • binding
    		•  1.85951177140712 bayes_pls_golite062009
  • transferase activity
    		•  1.77218599619559 bayes_pls_golite062009
  • protein binding
    		•  1.4657010373022 bayes_pls_golite062009
  • catalytic activity
    		•  0.2012862421225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle