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Protein Overview: SPAC17G8.06c

General Information:
Name(s) found: SPAC17G8.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • dihydroxy-acid dehydratase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 598 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: isoleucine biosynthetic process [ISSLink to PubMed article]
    valine biosynthetic process [ISSLink to PubMed article]
    leucine metabolic process [ISSLink to PubMed article]
    Molecular Function: dihydroxy-acid dehydratase activity [ISSLink to PubMed article]
    iron ion binding [IEA]
    4 iron, 4 sulfur cluster binding [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFCKLLRCQ NGIASKRAAL SLKGFKTSSI NLVEKKLNKY SETITGPKSQ GASQAMLYAT  60
   61 GLNEEDMKKP QVGIASCWYE GNPCNMHLLD LGRRVKEGVK KAGLTGFQFN TIGVSDGISM 120
  121 GTTGMRYSLQ SREIIADSIE TVMQGQWYDA NVSIPGCDKN MPGCLIAMGR FNRPSIMVYG 180
  181 GSIRAGHSPC QNNAPIDIVS AFQSYGEFIT GKIDEPTRHD IIRHACPGGG ACGGMYTANT 240
  241 MASCAEAMGM TLPGSSSYLA GSPEKFAECE AAGSAIKRLL VDDIKPRDIM TRSAFENAMV 300
  301 LTMTLGGSTN SVLHLIAIAK SVGITLTLDD FQAVSNRTPF IADMKPSGKY VMEDLFAIGG 360
  361 IPSVLKYLHA EGLIDGSNIT VTGKTLAENL RGFKDLAEGQ KIIRPLSNPI KTEGHLRVLR 420
  421 GSLAPEGSVA KITGKEGLNF TGKARVFDAE NDFIAALERG EFKKGEKTVV IIRFEGPKGG 480
  481 PGMPEMLKPS SAIMGAGLGK DVALLTDGRF SGGSHGFLIG HVDPEAQVGG PIALVQDGDV 540
  541 IEINAVKNTL DLMVDEKEMA RRRSVWKAPP LKYQQGTLLK YARNVSTASK GAVTDSLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..598] PSI-BLAST 174.0 No description for 2gp4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  5.35660492472618 bayes_pls_golite062009
  • catalytic activity
    		•  1.61959327305722 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.16841092671386 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.13002130445077 bayes_pls_golite062009
  • lyase activity
    		•  1.11228159918123 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle