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Protein Overview: hba1

General Information:
Name(s) found: hba1 / SPBC365.13c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • Ran GTPase binding protein Hba1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    nucleoplasm [IDALink to PubMed article]
    Biological Process: ribosomal small subunit export from nucleus [ISS]
    cellular response to oxidative stress [IGILink to PubMed article]
    response to caffeine [IMPLink to PubMed article]
    response to brefeldin A [IMPLink to PubMed article]
    protein export from nucleus [IMPLink to PubMed article]
    Molecular Function: Ran GTPase binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKMENNKD ESISTKNALE EKSNETKDET SKRKHDPAEE ESAVSTKVSK SEPLEDKGNA  60
   61 EVKEFKETTK SNGVKPEVEI TESTKIQKES NTEPCISTGG KVEEKELKVN KDVDENEGHV 120
  121 AVETGKKESA AKPAASVSPF SQFASFSNAS SPFSNVSTAS SEPKEEKSAF GAFASSKSAF 180
  181 TMKSVKDSPF KKFAAGTAVE TESGSGKEKE NDKKSSENFD ELLANTSAKA FENQKGSAGE 240
  241 TKSEPKEADK GSGDSTKSTM HQLSDSEIIT GEEEEESIFS VRARLYVVAD EKKTWKERGQ 300
  301 GILKVNVPKQ RGSGSGRLLM RNDAVHRVIM NVPLFQGMSK KSLQIASASS GGSANYLKIF 360
  361 VIENGKSVLY AVRVKDNSLA EQLRNHVLEA IPKGGREDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] FFAS03 1.23 No description for 2j63A was found.
    2 View Details [154..244] deduced N/A No confident structure predictions are available.
    3 View Details [245..399] PSI-BLAST 32.30103 Ran-binding protein 1, Ranbp1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.84059187652164 bayes_pls_golite062009
  • protein binding
    		•  2.52009208560575 bayes_pls_golite062009
  • Ran GTPase binding
    		•  1.07023555877478 bayes_pls_golite062009
  • RNA binding
    		•  0.250601320382389 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.22582246924414 bayes_pls_golite062009
  • DNA binding
    		•  0.0789830632554311 bayes_pls_golite062009
  • enzyme binding
    		•  0.00204662880329398 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle