| Protein: | hba1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hba1.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..7] | [391..1627] |
|
|
231.0 | [0..2] | [391..769] |
|
|
229.0 | [0..33] | [391..832] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MTSKMENNKD ESISTKNALE EKSNETKDET SKRKHDPAEE ESAVSTKVSK SEPLEDKGNA 60
61 EVKEFKETTK SNGVKPEVEI TESTKIQKES NTEPCISTGG KVEEKELKVN KDVDENEGHV 120
121 AVETGKKESA AKPAASVSPF SQFASFSNAS SPF
|
| Detection Method: |  |
| Confidence: | 1.23 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [154-244] |
1 11 21 31 41 51
| | | | | |
1 SNVSTASSEP KEEKSAFGAF ASSKSAFTMK SVKDSPFKKF AAGTAVETES GSGKEKENDK 60
61 KSSENFDELL ANTSAKAFEN QKGSAGETKS E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [245-399] |
1 11 21 31 41 51
| | | | | |
1 PKEADKGSGD STKSTMHQLS DSEIITGEEE EESIFSVRAR LYVVADEKKT WKERGQGILK 60
61 VNVPKQRGSG SGRLLMRNDA VHRVIMNVPL FQGMSKKSLQ IASASSGGSA NYLKIFVIEN 120
121 GKSVLYAVRV KDNSLAEQLR NHVLEAIPKG GREDA
|
| Detection Method: | |
| Confidence: | 32.30103 |
| Match: | 1k5dB |
| Description: | Ran-binding protein 1, Ranbp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.84059187652164 | bayes_pls_golite062009 |
| protein binding | 2.52009208560575 | bayes_pls_golite062009 |
| Ran GTPase binding | 1.07023555877478 | bayes_pls_golite062009 |
| RNA binding | 0.250601320382389 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.22582246924414 | bayes_pls_golite062009 |
| DNA binding | 0.0789830632554311 | bayes_pls_golite062009 |
| enzyme binding | 0.00204662880329398 | bayes_pls_golite062009 |
