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Protein Overview: yam8

General Information:
Name(s) found: yam8 / SPAC1F5.08c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • calcium transport protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: external side of plasma membrane [NASLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [ISSLink to PubMed article]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: calcium ion transmembrane transport [IMPLink to PubMed articleLink to PubMed article]
    regulation of fungal-type cell wall biogenesis [IMPLink to PubMed article]
    cellular calcium ion homeostasis [ICLink to PubMed article]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFFSTHLIL KILFFWSITR NIFGATYTSL LLNNTINGNI NDQSTAYYNL TWEGNTAYNV  60
   61 SLTLSTCTAF DGANDLMLYI SNNTFDEALP LDNFTITASE NGLATIFVTG YSPLYIAVSS 120
  121 AFSQFAPNFF VESGESTLEG NNVINYELAA GIDTPFSQYN ATKFLFAQDT DFQAALLITG 180
  181 NLTTNETSII PSYEIYVNPS NSTYDNTFNK FSSSFCAFQN NPSTVNTNNA DRSMTLRGLG 240
  241 PFAKEQFYLK GLDPNVTYTA YLVEPNIGQP GGTVYPGVTF TTKTSPACQL IYDLQFCSEV 300
  301 AYAVPGNSSL FSASALAEWY DQQAYGYYQN FTYTLDLIPC NATSWSAYSL LKNCSDCANS 360
  361 YKNWLCASVI PRCADINDNS SYLIYKNYDS RYPLIDEVIQ PGPYKEVLPC SYLCYSLASS 420
  421 CPLDLGFACP KAGYGLEFSY GEVSNVTGLI TCNAPGVEFY ESGSALLNIS WRTFFISLIF 480
  481 WILFVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] MSA 1.019982 View MSA. No confident structure predictions are available.
    2 View Details [185..268] deduced N/A No confident structure predictions are available.
    3 View Details [269..486] FFAS03 1.57 Secreted Frizzled-related protein 3 (SFRP-3;fzb)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • transmembrane receptor activity
    		•  1.96928126941717 bayes_pls_golite062009
  • receptor activity
    		•  1.93198638186764 bayes_pls_golite062009
  • binding
    		•  1.7353571770087 bayes_pls_golite062009
  • signal transducer activity
    		•  1.71958201584504 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.71958201584504 bayes_pls_golite062009
  • protein binding
    		•  1.03919942773652 bayes_pls_golite062009
  • Wnt receptor activity
    		•  0.129505171265921 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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