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Protein Overview: mid1

General Information:
Name(s) found: mid1 / SPCC4B3.15 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • medial ring protein Mid1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 920 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    medial cortex [IDALink to PubMed article]
    medial cortical node [IDALink to PubMed article]
    Biological Process: protein homooligomerization [IDALink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    cytokinesis, site selection [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEQEFSYRE AKDVSLDSKG LENSFLSSPN REKTPLFFEG NSNETSGYDQ TKNFTHGDGD  60
   61 MSLGNLSELN VATDLLESLD LRSMYMHGYG HLDSSFSSQH SPDNRKRMSS TSVFKRINSE 120
  121 EEGRIPSLTY SAGTMNSTSS STASLKGADI VADYETFNPD QNLAELSFDR SKSSRKRAVE 180
  181 VAEFSRAKTM SPLEYTVQHP YQSHNELSTN PARARAGSVP NLARIPSDVK PVPPAHLSAS 240
  241 STVGPRILPS LPKDTTEDNP ALERVETTAS LDMDYKPLEP LAPIQEAPVE DTSEPFSSVP 300
  301 EATLDDSDIS TESLRKKVLA KMEAKRISSG SSYASTLRKV YDFSELSLPT NGKDYDELYL 360
  361 QSSRNSEPEI STIINDSLQQ ENMDEDISAT SIPKSQAAYG HGSVTYHEVP RYNLTSASVG 420
  421 YSISSQRGRI KSSSTIDNLS AILSSEDLRH PSMQPVPGTK RTYSNYCENE PNKSSQSLVS 480
  481 SESHNVEGWN YSETGTVGFY DPSAEISASI DELRQSTPVA RDSELLSRAH SFDLNRLDLP 540
  541 SQDKSTSYEV PNGTENQSPR PVTSLGFVNE TFFEEKPKAP LPLGRFYIHL NSILNISISE 600
  601 VHSPIKIIVN TPTQNMQLPW QAVNGNNRLD HDFAFHVDDN FKVSFMFLDI PIEDKSNGSK 660
  661 GVSATKDVSN GKPAETKSKA RKFFDKLFNR RKKRKLNKAA AVENSKAKKS VVIKKVSGTA 720
  721 TLNLGNVKDS CFGKAFNVEI PIISRGFLEA IPVKINSIGK RTLGNLTLTC LYIPELSVPE 780
  781 QELPFTLEQA TMDLRHVRSN YLYNEGYLYR LEDSSIRRRF VVLRSKQLNF YAEKGGQYLD 840
  841 TFQLSKTVVS IPMVNFSEAV SNLGLVAGIL ATSVDRRHVQ LFADSKKVCQ KWLQVMNSRS 900
  901 FALDRGTEKL WLQEYVNFMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] deduced N/A No confident structure predictions are available.
    2 View Details [119..315] MSA 4.215997 View MSA. No confident structure predictions are available.
    3 View Details [316..582] deduced N/A No confident structure predictions are available.
    4 View Details [583..703] deduced N/A No confident structure predictions are available.
    5 View Details [704..920] FFAS03 1.28 Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to Inositol (1,3,4,5)-tetrakisphosphate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  3.01457814746126 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.24286420828007 bayes_pls_golite062009
  • actin binding
    		•  2.16868037795548 bayes_pls_golite062009
  • protein binding
    		•  2.16501942211182 bayes_pls_golite062009
  • transporter activity
    		•  1.32787835803882 bayes_pls_golite062009
  • actin filament binding
    		•  0.958313601060859 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.622066425402481 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.598891515214317 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle