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Protein Overview: spe1

General Information:
Name(s) found: spe1 / SPAC144.04c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • ornithine decarboxylase Spe1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: pantothenate biosynthetic process [ISSLink to PubMed article]
    putrescine biosynthetic process [ISSLink to PubMed article]
    ornithine catabolic process, by decarboxylation [ICLink to PubMed article]
    Molecular Function: ornithine decarboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAIMEKNML VSESLRTTEL LGHVKPIDSV VTWSSPGSSR QAIGEAFKNT IEEIERAAVR  60
   61 GEPADSDAFF VADLNGVYRQ LLRWHAKLPR VQPFYAVKCN PDPKVLALLN KFGTGFDCAS 120
  121 KGELEQILGL GVSPDRIVYA NPCKAITYVR YAASKGINLM TFDNADELYK VKQHHPNSRL 180
  181 LLRISTDDSN SLCRLSLKFG ASLDDTGKLL DIAKSLELNV VGVSFHVGSG SYDPSAFLDA 240
  241 IQRSRQVFDQ GLERGFNFDL LDIGGGFMND SFDGVADLIR SALDTYFDPS IRVISEPGRF 300
  301 FVSSSFTLAV NVIAKRKLDD EEKVMYYVND GVYGSLNCIL FDHQHPVARV LKCGSRFVYN 360
  361 DLVGTGQHRC FIWGPTCDSL DVIANDAHLP YELNVGDWIY FEDAGAYTVA AASCFNGFKT 420
  421 SRIVYLDTDI LD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 94.154902 No description for 2oo0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle