Protein Overview: cox6

General Information:
Name(s) found:	cox6 / SPAC1B2.04 [Sanger Pombe]
Description(s) found: Found 18 descriptions. SHOW ALL	cytochrome c oxidase subunit VI [Sanger Pombe]
Organism:	Schizosaccharomyces pombe
Length:	140 amino acids
Gene Ontology:
Cellular Component:	mitochondrion [IDA] mitochondrial respiratory chain complex IV [ISS]
Biological Process:	transmembrane transport [IC] mitochondrial electron transport, cytochrome c to oxygen [ISS] aerobic respiration [ISS]
Molecular Function:	cytochrome-c oxidase activity [ISS] iron ion binding [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MKAVQRIFQT GRFSVAAGPS VRFQAGFLAA NRQVRFSSNH GVSLEEINTK YNDFFSNVQD 60 61 QFELQRGLNN CFAYDIVPSS DVIEQALRAA RRVNDFPTAV RIFEGIKVKL PTKEQYQAYV 120 121 KELKPVCNEL GIVLKEDLFK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..140]	PSI-BLAST	49.39794	Cytochrome c oxidase subunit E

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
cytochrome-c oxidase activity	13.5907467824992	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors	13.5907467824992	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor	13.5907467824992	bayes_pls_golite062009
heme-copper terminal oxidase activity	13.2768834037467	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	7.11269745957917	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	6.95782581983891	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	6.3444074949287	bayes_pls_golite062009
cation transmembrane transporter activity	6.0779545597528	bayes_pls_golite062009
oxidoreductase activity	6.07124287051458	bayes_pls_golite062009
ion transmembrane transporter activity	5.87041225771312	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	5.44223516926039	bayes_pls_golite062009
substrate-specific transporter activity	5.2274118132466	bayes_pls_golite062009
electron carrier activity	1.73787331766336	bayes_pls_golite062009
catalytic activity	1.17990683373825	bayes_pls_golite062009
transporter activity	0.0449232084165001	bayes_pls_golite062009
transmembrane transporter activity	0.0241192035901199	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.69

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle