Protein Overview: cox4

General Information:
Name(s) found:	cox4 / SPAC1296.02 [Sanger Pombe]
Description(s) found: Found 20 descriptions. SHOW ALL	cytochrome c oxidase subunit IV [Sanger Pombe]
Organism:	Schizosaccharomyces pombe
Length:	164 amino acids
Gene Ontology:
Cellular Component:	mitochondrion [IDA] mitochondrial respiratory chain complex IV [ISS]
Biological Process:	transmembrane transport [IC] mitochondrial electron transport, cytochrome c to oxygen [ISS] aerobic respiration [ISS]
Molecular Function:	zinc ion binding [IEA] cytochrome-c oxidase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMNSMLRVS RQRAAVRSTV SLYRGFVSAS IRRNEQNVVK AAAQELANAK EPSDLIGPGG  60
   61 RDGEVPTDLE QATGLERYEL LSELSGRDAF DMKPLDASRK GTLTDPIMVT SLDPYRHIGC 120
  121 TGSPSGSHNL IWMTVYKDKL RRCPECGSVY KLKFMGDPNA EHSH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..164]	PSI-BLAST	41.39794	Cytochrome c oxidase Subunit F

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
cytochrome-c oxidase activity	11.8078336041861	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors	11.8078336041861	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor	11.8078336041861	bayes_pls_golite062009
heme-copper terminal oxidase activity	11.4955994709345	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	5.35533851539468	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	5.20400060522221	bayes_pls_golite062009
electron carrier activity	4.79439258177657	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	4.61075334342911	bayes_pls_golite062009
oxidoreductase activity	4.60275002826443	bayes_pls_golite062009
cation transmembrane transporter activity	4.37169157675849	bayes_pls_golite062009
ion transmembrane transporter activity	4.17914534558054	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	3.78062052867494	bayes_pls_golite062009
substrate-specific transporter activity	3.5925267150231	bayes_pls_golite062009
binding	1.8195473608185	bayes_pls_golite062009
catalytic activity	0.176396048613815	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.76

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle