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Protein Overview: nse6

General Information:
Name(s) found: nse6 / SPAC11E3.08c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Smc5-6 complex non-SMC subunit Nse6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 522 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Smc5-Smc6 complex [IDALink to PubMed article]
    Biological Process: replication fork protection [IGILink to PubMed article]
    response to DNA damage stimulus [IMPLink to PubMed article]
    Molecular Function: protein homodimerization activity [IPILink to PubMed article]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNASNNISKF PDLDNSSKLI DHILDSDDSE ELDELPDISS LVPSARAQSR KQYLKNDSSN  60
   61 SSTYRWNIDL LSSTATIDDS VAKRRKLAVQ NLLQYDSTQT FQTGDEIDEL IGKSVGSNVL 120
  121 NVLRSNPIYD DDLRYEYCSN SKARVPDWNT LKAECLKDND LEFNEGIIPT TFGDLLSAKL 180
  181 VPLDIALSIC SLQFFRSLGD TTCSEWIANL EKIFYSYKSS SNNLNQIVRF IFETTADMIG 240
  241 IDLAKRQVPI QLERTSASEN LKSNLKIKVI NFLKCCGTLY RFSDDTVRFE MIQDACRILI 300
  301 DNQVGSFCKW QFSQFMELPI SLNPDFLISN IHKVSESPRV WVTILSSLSR SCQKFRKKIA 360
  361 FTLFVGKQSK NDDSDFSSLC QRLDEISASC NNDYTTLLYQ IRTFGYAVDE KHFKTNERLE 420
  421 CLLEKLRKID LTISGSTDHL LLSRCEVKDC IHRLFMVLYY LNTNSAPELE RIIESDLPNN 480
  481 NKQKDRYFKD KTSNLSMKEN KSFSAKKVKK GKKKNKRQAY KR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.
    2 View Details [161..370] deduced N/A No confident structure predictions are available.
    3 View Details [371..522] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle