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View Structure Prediction Details

Protein: nse6
Organism: Schizosaccharomyces pombe
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for nse6.

Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNASNNISKF PDLDNSSKLI DHILDSDDSE ELDELPDISS LVPSARAQSR KQYLKNDSSN  60
   61 SSTYRWNIDL LSSTATIDDS VAKRRKLAVQ NLLQYDSTQT FQTGDEIDEL IGKSVGSNVL 120
  121 NVLRSNPIYD DDLRYEYCSN SKARVPDWNT LKAECLKDND 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEFNEGIIPT TFGDLLSAKL VPLDIALSIC SLQFFRSLGD TTCSEWIANL EKIFYSYKSS  60
   61 SNNLNQIVRF IFETTADMIG IDLAKRQVPI QLERTSASEN LKSNLKIKVI NFLKCCGTLY 120
  121 RFSDDTVRFE MIQDACRILI DNQVGSFCKW QFSQFMELPI SLNPDFLISN IHKVSESPRV 180
  181 WVTILSSLSR SCQKFRKKIA FTLFVGKQSK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [371-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDDSDFSSLC QRLDEISASC NNDYTTLLYQ IRTFGYAVDE KHFKTNERLE CLLEKLRKID  60
   61 LTISGSTDHL LLSRCEVKDC IHRLFMVLYY LNTNSAPELE RIIESDLPNN NKQKDRYFKD 120
  121 KTSNLSMKEN KSFSAKKVKK GKKKNKRQAY KR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle