YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cnd3

General Information:
Name(s) found: cnd3 / SPCC188.03 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • condensin subunit Cnd3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 875 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    condensin complex [IDALink to PubMed article]
    Biological Process: mitotic chromosome condensation [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCIQIISSS QTSIAGHRKL CNKLFTLRTQ EGFETDILRA LNIILTVKKG NSNADRVLRF  60
   61 LVTFVNYLQQ KDPEIDIVQP ILKHILRGLD AKDKTVRYRC CQIIARVVNC VKEIDDDLYN 120
  121 TLKEKLLSRV LDRESIVRLE AVVALSRLQE DTGDEENDVR NILLFLLQND PSSEVRRSVL 180
  181 LNIEVSNSTL PFILERARDV DAANRKCVYA RVLPKIGDFR YLSIKKRVRI LKWGLNDRDE 240
  241 SVEKAAADML AYQWIENADN NLLELLERLD VSNNSDVAVL AIKKFFDVRV DSLSQLEFPE 300
  301 QFWLELTAES SLLARTFNEI CIEKNYTDLL DKMPEVVQLT YYIERQYVSL RDKSSYDESC 360
  361 FIIEQLLYIG LSQDMVDEIG RRKLLKSLTN SLSTMALPDS LISLHIELLR KLCSSENDFC 420
  421 SLLVEIITEV FEQGHSQNQT EEQGNSNAPE LNKNDYEGEE ITVSQKSPSP SLPPNELNEP 480
  481 EPDDMDGYKE AFNELRCLSY VQCLFENITS SLNENLYMVD MLKTLIIPAV RSHDLPIREK 540
  541 GLECLSLVCL LNADLAFENV PLYLHCYEKG SVVLKCTAIR TLTDMLIQHG KAKFTEYEDA 600
  601 ISSILFEALG EFENAELQTL GAEAIAKLLV ILHYRDELFL KPLIIQYFEP NTVDNHALRQ 660
  661 VLGYFFPVYA FGAHENQWRI ATIFCDALLS LLEIYRDLDE DDVQLSIGHI AQQMLDWTDN 720
  721 EKLYERKTQT GDDYIALNHN VHLHLANMIF ESLPNASEGK ERKFMISLLG KLKIPTDLPS 780
  781 SDYQRTKRKL ETYESHGFTM DSTSLSILAK FERMLLQNEE ARSKFEETEE ERLMENAEEN 840
  841 EHAGAEAISG EIIPDTVEAN MEDEEEVYVK QEEDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..771] PSI-BLAST 33.0 Karyopherin beta2
    2 View Details [772..875] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.91891696274037 bayes_pls_golite062009
  • protein binding
    		•  1.94427330399472 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.705954065870404 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.169755106399802 bayes_pls_golite062009
  • actin binding
    		•  0.0133067933592343 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle