YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cap1

General Information:
Name(s) found: cap1 / SPCC306.09c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • adenylyl cyclase-associated protein Cap1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    actin cortical patch [ISSLink to PubMed article]
    Biological Process: ascospore formation [IMPLink to PubMed article]
    cytoskeleton organization [ISSLink to PubMed article]
    regulation of adenylate cyclase activity [IGILink to PubMed article]
    conjugation with cellular fusion [IMPLink to PubMed article]
    cellular response to starvation [IMPLink to PubMed article]
    Molecular Function: actin binding [NASLink to PubMed article]
    adenylate cyclase binding [IPILink to PubMed article]
    cytoskeletal protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMINIRET GYNFTTILKR LEAATSRLED LVESGHKPLP NMHRPSRDSN SQTHNISFNI  60
   61 GTPTAPTVST GSPAVASLHD QVAAAISPRN RSLTSTSAVE AVPASISAYD EFCSKYLSKY 120
  121 MELSKKIGGL IAEQSEHVEK AFNLLRQVLS VALKAQKPDM DSPELLEFLK PIQSELLTIT 180
  181 NIRDEHRTAP EFNQLSTVMS GISILGWVTV EPTPLSFMSE MKDSSQFYAN RVMKEFKGKD 240
  241 DLQIEWVRSY LTLLTELITY VKTHFKTGLT WSTKQDAVPL KTALANLSAS KTQAPSSGDS 300
  301 ANGGLPPPPP PPPPSNDFWK DSNEPAPADN KGDMGAVFAE INKGEGITSG LRKVDKSEMT 360
  361 HKNPNLRKTG PTPGPKPKIK SSAPSKPAET APVKPPRIEL ENTKWFVENQ VDNHSIVLDS 420
  421 VELNHSVQIF GCSNCTIIIK GKLNTVSMSN CKRTSVVVDT LVAAFDIAKC SNFGCQVMNH 480
  481 VPMIVIDQCD GGSIYLSKSS LSSEVVTSKS TSLNINVPNE EGDYAERAVP EQIKHKVNEK 540
  541 GELVSEIVRH E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] MSA 1.039994 View MSA. No confident structure predictions are available.
    2 View Details [86..328] PSI-BLAST 67.69897 The crystal structure of the N-terminal domain of CAP indicates variable oligomerisation
    3 View Details [329..394] MSA 1.056988 View MSA. No confident structure predictions are available.
    4 View Details [395..551] PSI-BLAST 76.221849 C-terminal domain of adenylylcyclase associated protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • actin binding
    		•  5.81884714997094 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.39652693178112 bayes_pls_golite062009
  • adenylate cyclase binding
    		•  2.08284870927262 bayes_pls_golite062009
  • binding
    		•  1.8340549733034 bayes_pls_golite062009
  • enzyme binding
    		•  1.53072876683435 bayes_pls_golite062009
  • protein binding
    		•  0.871734119777931 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • actin binding
    		•  4.94933252861141 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.21664682046338 bayes_pls_golite062009
  • actin monomer binding
    		•  2.04365563273836 bayes_pls_golite062009
  • binding
    		•  1.57578562719958 bayes_pls_golite062009
  • adenylate cyclase binding
    		•  1.13353932343086 bayes_pls_golite062009
  • enzyme binding
    		•  0.705135358375 bayes_pls_golite062009
  • protein binding
    		•  0.651719649953198 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle