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Protein Overview: rsc4

General Information:
Name(s) found: rsc4 / SPBC1734.15 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • RSC complex subunit Rsc4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 542 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    RSC complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    positive regulation of gene-specific transcription from RNA polymerase II promoter [IEPLink to PubMed article]
    negative regulation of gene-specific transcription from RNA polymerase II promoter [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDDSHNAPF DKTKFDEVLE ALVGLKDNEG NPFDDIFEEL PSKRYFPDYY QIIQKPICYK  60
   61 MMRNKAKTGK YLSMGDFYDD IRLMVSNAQT YNMPGSLVYE CSVLIANTAN SLESKDGTLN 120
  121 EEENEEMESS INEEHKPGTN EIDVPKVIQN ILDALHEEKD EQGRFLIDIF IDLPSKRLYP 180
  181 DYYEIIKSPM TIKMLEKRFK KGEYTTLESF VKDLNQMFIN AKTYNAPGSF VYEDAEKLSQ 240
  241 LSSSLISSFS EQPKEHSPAT SKHEPEETPA SPTPSVSAST SRERSTSVAP SFITSDQAAT 300
  301 PDVLKSEEAH VESFSKESEK DQTPIPEDVP SPMDTLSQAN YGAFALIKSF PSTPVPDFLN 360
  361 FSHKSVMGRS TFNMPNFPEP KFFEDIPNTE RCILSAFICS PPQLPLPNPL RMYLPCPSLN 420
  421 STEVSVITLA PQHSFLNIVI NLNPALALKS YTIITLLNGK RLGAGVSTPP STLYALEGIK 480
  481 HTEEPIRTVY EAKLSVGLNC LEFVLGSTEP VEPPSIEPGL PASAYSRTVE RERFVLMAYV 540
  541 QP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 36.69897 TAFII250 double bromodomain module
    2 View Details [261..401] MSA 1.170996 View MSA. No confident structure predictions are available.
    3 View Details [402..542] MSA 4.164994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle