| Protein: | rsc4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 542 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rsc4.
| Description | E-value | Query Range |
Subject Range |
|
|
177.0 | [0..5] | [305..434] |
|
|
175.0 | [0..6] | [305..482] |
|
|
174.0 | [0..5] | [305..434] |
|
|
174.0 | [0..6] | [305..514] |
|
Region A: Residues: [1-260] |
1 11 21 31 41 51
| | | | | |
1 MVDDSHNAPF DKTKFDEVLE ALVGLKDNEG NPFDDIFEEL PSKRYFPDYY QIIQKPICYK 60
61 MMRNKAKTGK YLSMGDFYDD IRLMVSNAQT YNMPGSLVYE CSVLIANTAN SLESKDGTLN 120
121 EEENEEMESS INEEHKPGTN EIDVPKVIQN ILDALHEEKD EQGRFLIDIF IDLPSKRLYP 180
181 DYYEIIKSPM TIKMLEKRFK KGEYTTLESF VKDLNQMFIN AKTYNAPGSF VYEDAEKLSQ 240
241 LSSSLISSFS EQPKEHSPAT
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [261-401] |
1 11 21 31 41 51
| | | | | |
1 SKHEPEETPA SPTPSVSAST SRERSTSVAP SFITSDQAAT PDVLKSEEAH VESFSKESEK 60
61 DQTPIPEDVP SPMDTLSQAN YGAFALIKSF PSTPVPDFLN FSHKSVMGRS TFNMPNFPEP 120
121 KFFEDIPNTE RCILSAFICS P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [402-542] |
1 11 21 31 41 51
| | | | | |
1 PQLPLPNPLR MYLPCPSLNS TEVSVITLAP QHSFLNIVIN LNPALALKSY TIITLLNGKR 60
61 LGAGVSTPPS TLYALEGIKH TEEPIRTVYE AKLSVGLNCL EFVLGSTEPV EPPSIEPGLP 120
121 ASAYSRTVER ERFVLMAYVQ P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
