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Protein Overview: alr2

General Information:
Name(s) found: alr2 / SPBC359.02 [Sanger Pombe]
Description(s) found:
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  • gi|7838267|emb|CAB91571.1| alanine racemase Alr2 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19111844|ref|NP_595052.1| alanine racemase Alr2 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|12229663|sp|Q9P5N3.1|ALR2_SCHPO RecName: Full=Putative alanine racemase C359.02 [NCBI NR]
  • alanine racemase Alr2 [Sanger Pombe]
  • Putative alanine racemase C359.02 OS=Schizosaccharomyces pombe GN=SPBC359.02 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE ALANINE RACEMASE; NO APPARENT S. CEREVISIAE ORTHOLOG: ;N0ACC; [pompepVF.fasta]
  • PUTATIVE ALANINE RACEMASE: ;N0ACC; [pompepV13]
  • Putative alanine racemase C359.02 (EC 5.1.1.1) [pompep4896]
  • |||putative alanine racemase [pompepnew.fasta]
  • |||alanine racemase (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative alanine racemase [Schizosaccharomyces pombe]gi|7838267|emb|CAB91571.1| SPBC359.02 [Schizosaccharomyces pombe]gi|12229663|sp|Q9P5N3|ALR2_SCHPO Putative alanine racemase C359.02 [nrdb_11152004_Chlamydomonas]
  • |alr1||alanine racemase |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9P5N3) Putative alanine racemase C359.02 (EC 5.1.1.1) [pompep4896_normal_reversed]
  • |alr2||alanine racemase Alr2|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • Putative alanine racemase C359.02 [nr-271106-contam.fasta]
  • SPBC359.02 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • alanine racemase [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |alr2||alanine racemase Alr2 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Putative alanine racemase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alr2 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 370 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: alanine metabolic process [ISSLink to PubMed article]
    Molecular Function: alanine racemase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGARAVIDL RAIGYNYNLI RELLDEKNPD AHILCILKAN AYGHGAVEVA QFLAKYCSAE  60
   61 GFGVASIEEA LELRLSGIQN RILLLEGFFT DEDELSLIDK YNFSITIHCE EQLKSFMNYP 120
  121 FKKPVEVHLK LDSGMNRLGF TPAEYADKYR LLKNHKNVSG IVKATHFAFA DIPEKSEYTL 180
  181 KQWRIFEKAA GCLPDPLSAG GGVIVVGWLN TIHMDWLRTG SMLYGLDPYD LDAKAPELPK 240
  241 PLIPAMKLMS TIVCVKHVEK DQPIGYGGAY VTTRDSLIGV VAIGYGDGFP QVRNGCPVII 300
  301 NGKRVPTVGK VCMDMLAIDV TDVPDVKRGD DVVLWGNPEL TIEEVSTFSN ENPFEIITGL 360
  361 TRRVPLQYTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..370] PSI-BLAST 79.0 The 1.45 A crystal structure of alanine racemase from a pathogenic bacterium, Pseudomonas aeruginosa, contains both internal and external aldimine forms

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alanine racemase activity
    		•  2.62362449847897 bayes_pls_golite062009
  • amino-acid racemase activity
    		•  2.31165775898309 bayes_pls_golite062009
  • racemase and epimerase activity, acting on amino acids and derivatives
    		•  2.17003836264776 bayes_pls_golite062009
  • catalytic activity
    		•  1.23611818854966 bayes_pls_golite062009
  • binding
    		•  0.911032619175149 bayes_pls_golite062009
  • diaminopimelate decarboxylase activity
    		•  0.492894938678183 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.328743179708914 bayes_pls_golite062009
  • lyase activity
    		•  0.320782640542698 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.14065879331273 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle