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Protein Overview: alp7

General Information:
Name(s) found: alp7 / SPAC890.02c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • TACC homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    microtubule cytoskeleton [IDALink to PubMed articleLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed articleLink to PubMed article]
    condensed nuclear chromosome kinetochore [IDALink to PubMed article]
    TACC/TOG complex [IDALink to PubMed article]
    Biological Process: spindle astral microtubule organization [IMPLink to PubMed article]
    establishment of mitotic spindle orientation [IMPLink to PubMed article]
    spindle assembly [IMPLink to PubMed article]
    establishment or maintenance of cell polarity [IMPLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    microtubule cytoskeleton organization [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDIVSSSTD YSRRSPSSSS IGTNETDHTG FHEKRQGASS ESLIPPAQRS SEESMPAPKL  60
   61 FPKLTSKPNP QLNLKDTLNK RVSDRLQALE LNKSFDFSGT PRPMHPISHP LSQHKTPEFK 120
  121 HRKRNVESIL TPKNPSLFSS SNAASQRGSL NTAPSNFAYS HSSSLQTSAS SRPPVLSNGS 180
  181 FPRQTNTAPL NPPVHLKDNI RNSATPSTSQ ADIPTQYPIN STQKQQAKYE AEIEGYKAKL 240
  241 AGTYHEISVL QNTIVNVSGQ LIAVNDQLQQ LRSGKASTSP STKDTNMRLV EGHNEETLAL 300
  301 QRGKYTQEEV DKLIQERMEK VAEDLHAQYS AKHTQKINAF KANYARKYEA TIQELQNQIG 360
  361 TAPNAPKISN SNWEEERRAL KADNQTLQKQ LEKAIQERQD MSDFLNNFKA DMAKSDKLLM 420
  421 QQQSQQTGDL ETLRLQLQAL QEELRVEREE RQQLIQMSED LVIAMDQLNL EQKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 20.154902 Heavy meromyosin subfragment
    2 View Details [318..474] PSI-BLAST 14.0 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle