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Protein Overview: FBpp0311904, Rpp...

General Information:
Name(s) found: FBpp0311904 [FlyBase]
Rpp20-PA / FBpp0099986 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=X:join(19638562..19638714,19638788..19639138); ID=FBpp0311904; name=Rpp20-PB; parent=FBgn0066304,FBtr0346040; dbxref=FlyBase:FBpp0311904,FlyBase_Annotation_IDs:CG33931-PB; MD5=13260518925935001e5abf0605395fc8; length=167; release=r5.56; species=Dmel; [FlyBase]
  • The gene Rpp20 is referred to in FlyBase by the symbol Dmel\Rpp20 (CG33931, FBgn0066304). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19638466..19639780. It has the cytological map location 18E5. There is experimental evidence that it has the molecular function</span>: protein binding. The biological processes in which it is involved are not known. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 167 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mitochondrial ribonuclease P complex [NAS]
    cytoplasm [IDA]
    ribonuclease P complex [NAS]
    Biological Process: NONE FOUND
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGSNYPEHG TKPRSAKYHK QQNHRVVRKQ PPRPAVSDRH NIYITSKTDF KAQQRRCEEL  60
   61 INSGAHEIFL HCMGFSVTRG LNIALRLVQN SDGALSYAIN TSTVQLVDEL HPLCDAEDIT 120
  121 FRQRNNSALH IKILNNSLFD IAVPQPSQSQ TQAQSLGQFR GKAKARQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] PSI-BLAST 21.0 Structure of a Sir2 substrate, alba, reveals a mechanism for deactylation-induced enhancement of DNA-binding


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle