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View Structure Prediction Details

Protein: FBpp0311904, Rpp...
Organism: Drosophila melanogaster
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311904, Rpp....

Description E-value Query
Range
Subject
Range
gi|32526671 - gi|32526671|dbj|BAC79194.1| chloroplast nucleoid DNA-binding protein -like protein [Oryza sativa Jap...
202.0 [0..3] [165..476]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGSNYPEHG TKPRSAKYHK QQNHRVVRKQ PPRPAVSDRH NIYITSKTDF KAQQRRCEEL  60
   61 INSGAHEIFL HCMGFSVTRG LNIALRLVQN SDGALSYAIN TSTVQLVDEL HPLCDAEDIT 120
  121 FRQRNNSALH IKILNNSLFD IAVPQPSQSQ TQAQSLGQFR GKAKARQ

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Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1nfhA
Description: Structure of a Sir2 substrate, alba, reveals a mechanism for deactylation-induced enhancement of DNA-binding
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle