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Protein Overview: CG6398-PA, FBpp0...

General Information:
Name(s) found: FBpp0309626 [FlyBase]
CG6398-PA / FBpp0074236 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=X:join(17725354..17725479,17734193..17734322,17734388..17734728,17734795..17734960,17735023..17735132); ID=FBpp0309626; name=CG6398-PB; parent=FBgn0030870,FBtr0342784; dbxref=FlyBase:FBpp0309626,FlyBase_Annotation_IDs:CG6398-PB; MD5=625fd89558aa69c1afa0c17f25a8f48d; length=290; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6398 (CG6398, FBgn0030870). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17724873..17735630. It has the cytological map location 16D5-16D7. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: septate junction [ISS]
    Biological Process: [NOT]establishment of glial blood-brain barrier [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCSAVTLSI ATICAIIATA LLAIAFSTDN WLHYDVWRNQ IQSFAAKHSD AESLLHNMNV  60
   61 KYYYYTRTRG LFRICYPKER PPVSAVPTYL SPIETHCSNI DYFPQAEDEK IANEDATSRL 120
  121 HLARSCIALF IISFVTIFCA FWTGLSGCWK RSSGAITATS ILLLVTCLLA AGAMGLWHTV 180
  181 EFFEKEKVVG EDYFQQWNTV LRDNTKIAYD WSYIVAWAGI GTCLLASILL SGAAVCLRNE 240
  241 REKEEQLNLQ YLMPVYSQKQ PPYPPYANYA QPQIYPGPYY HGSQYGPYNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] MSA 4.223994 View MSA. No confident structure predictions are available.
    2 View Details [99..290] MSA 60.284997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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