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Protein Overview: FBpp0309143, crl-PA

General Information:
Name(s) found: FBpp0309143 [FlyBase]
crl-PA / FBpp0074058 [FlyBase]
Description(s) found:
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  • gi|7293244|gb|AAF48626.1| courtless [Drosophila melanogaster] [NCBI NR]
  • gi|24642559|ref|NP_524684.2| courtless [Drosophila melanogaster] [NCBI NR]
  • gi|17945787|gb|AAL48941.1| RE34144p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:join(16488034..16488076,16488139..16488220,16488304..16488563,16488724..16488842); ID=FBpp0309143; name=crl-PB; parent=FBgn0015374,FBtr0340157; dbxref=FlyBase:FBpp0309143,FlyBase_Annotation_IDs:CG4443-PB; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r5.56; species=Dmel; [FlyBase]
  • The gene courtless is referred to in FlyBase by the symbol Dmel\crl (CG4443, FBgn0015374). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16487712..16489453. It has the cytological map location 14F1. Based on sequence similarity, it is predicted to have molecular function</span>: ubiquitin-protein ligase activity. There is experimental evidence that it is involved in the biological process</span>: male meiosis; male courtship behavior; spermatogenesis. 12 alleles are reported. The phenotype of these alleles is annotated with: spermatid. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4443-PA translation from_gene[CG4443 crl FBgn0015374] seq_release:3 mol_weight=18456 cds_boundaries:(X:16,325,021..16,325,826[+]) aa_length:167 transcript_info:[CG4443-RA seq_release:3] gene_info:[gene symbol:crl FBgn0015374 gene_boundaries:(X:16,32 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VXE8) CG4443 protein (EC 6.3.2.19) (RE34144p) (Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) [DrosMelano7227.FASTAC.txt]
  • (AE003502) Ubc7 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4443-PA [Drosophila melanogaster]gi|17945787|gb|AAL48941.1| RE34144p [Drosophila melanogaster]gi|24642559|ref|NP_524684.2| CG4443-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(16488034..16488076,16488139..16488220,16488304..16488563,16488724..16488842); ID=FBpp0074058; name=crl-PA; parent=FBgn0015374,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP [fly-100309-contam.fasta]
  • courtless CG4443-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE34144p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4443-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(16488034..16488076,16488139..16488220,16488304..16488563,16488724..16488842); ID=FBpp0074058; name=crl-PA; parent=FBgn0015374,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(16488034..16488076,16488139..16488220,16488304..16488563,16488724..16488842); ID=FBpp0074058; name=crl-PA; parent=FBgn0015374,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Ubiquitin carrier protein OS=Drosophila melanogaster GN=crl PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(16488034..16488076,16488139..16488220,16488304..16488563,16488724..16488842); ID=FBpp0074058; name=crl-PA; parent=FBgn0015374,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626,FlyMine:FBpp0074058,modMine:FBpp0074058; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Courtless OS=Drosophila melanogaster GN=crl PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0074058; name=Ubc7-PA; parent=FBgn0267384,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626,FlyMine:FBpp0074058,modMine:FBpp0074058; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0309143; name=Ubc7-PB; parent=FBgn0267384,FBtr0340157; dbxref=FlyBase:FBpp0309143,FlyBase_Annotation_IDs:CG4443-PB,GB_protein:AHN59804,REFSEQ:NP_001285334; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0074058; name=Ubc7-PA; parent=FBgn0267384,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626,FlyMine:FBpp0074058,modMine:FBpp0074058; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0309143; name=Ubc7-PB; parent=FBgn0267384,FBtr0340157; dbxref=FlyBase:FBpp0309143,FlyBase_Annotation_IDs:CG4443-PB,GB_protein:AHN59804,REFSEQ:NP_001285334; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • RE34144p OS=Drosophila melanogaster GN=Ubc7 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0074058 type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0074058; name=Ubc7-PA; parent=FBgn0267384,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626,FlyMine:FBpp0074058,modMine:FBpp0074058; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0309143 type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0309143; name=Ubc7-PB; parent=FBgn0267384,FBtr0340157; dbxref=FlyBase:FBpp0309143,FlyBase_Annotation_IDs:CG4443-PB,GB_protein:AHN59804,REFSEQ:NP_001285334; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0074058; name=Ubc7-PA; parent=FBgn0267384,FBtr0074283; dbxref=FlyBase:FBpp0074058,FlyBase_Annotation_IDs:CG4443-PA,GB_protein:AAF48626.1,REFSEQ:NP_524684,GB_protein:AAF48626,UniProt/TrEMBL:Q9VXE8,FlyMine:FBpp0074058,modMine:FBpp0074058; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(16594001..16594043,16594106..16594187,16594271..16594530,16594691..16594809); ID=FBpp0309143; name=Ubc7-PB; parent=FBgn0267384,FBtr0340157; dbxref=FlyBase:FBpp0309143,FlyBase_Annotation_IDs:CG4443-PB,GB_protein:AHN59804,REFSEQ:NP_001285334,UniProt/TrEMBL:Q9VXE8; MD5=c87d84932ae70083f497504822d472d3; length=167; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 167 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of protein metabolic process [IEA]
    spermatogenesis [IMP][TAS]
    male meiosis [IMP]
    courtship behavior [NAS][TAS]
    male courtship behavior [IMP][TAS]
    post-translational protein modification [IEA]
    Molecular Function: ubiquitin-protein ligase activity [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSALRRLM AEYKQLTLDP PEGIVAGPIS EDNFFEWEAL IAGPEGTCFE GGVFPARLIF  60
   61 PTDYPLSPPK MKFTCDMFHP NIFADGRVCI SILHAPGDDP MGYELSAERW SPVQSVEKIL 120
  121 LSVVSMLAEP NDESGANVDA AIMWREQRDE FNAIARRLVR KTLGLPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] PSI-BLAST 52.221849 No description for 2cyxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle