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Protein Overview: Scamp-PA, FBpp03...

General Information:
Name(s) found: FBpp0304842 [FlyBase]
Scamp-PA / FBpp0073895 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • type=protein; loc=X:complement(15341455..15341863,15341928..15342057,15342412..15342613,15343314..15343541,15343738..15343800); ID=FBpp0304842; name=Scamp-PC; parent=FBgn0040285,FBtr0332591; dbxref=REFSEQ:NP_001259572,GB_protein:AGB95414,FlyBase:FBpp0304842,FlyBase_Annotation_IDs:CG9195-PC; MD5=22c38902b1d99dfed53e3722d4c131cf; length=343; release=r5.56; species=Dmel; [FlyBase]
  • The gene Scamp is referred to in FlyBase by the symbol Dmel\Scamp (CG9195, FBgn0040285). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:15340211..15343922. It has the cytological map location 13C3. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: synaptic vesicle exocytosis. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [NAS]
    integral to membrane [IEA]
    Biological Process: protein transport [IEA]
    synaptic vesicle exocytosis [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSGLDENP FGEPNLDNPF ADPAIQQARR LQSGAALVSL EDYNPFEEQA KPQLQINSTN  60
   61 TAAVVQPLSQ NIPPPQTSSL GASAPSTSIQ ITSEELQRRQ EELDRKAAEL DRREQQLQGN 120
  121 VPQLNNWPPL PDNFCVKPCF YQDFEVEIPP EFQKLVKRLY YIWIFYTMTL LANVIGGLIL 180
  181 LFHAGEFETF FLAIFYTMLF SPASYVCWFR PAYKAFRNDS SFNFMVFFFI YFFQTLYSIV 240
  241 QAVGFNKMGY CGFITAIGQF DGQASGIIVG ILLLNVAFCF TAVAVANVLM ITKIHSIYRS 300
  301 TGASMAKAQA EFTTEFLRNQ HVQEAASSAV NTAINSQFNN SRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 12.054996 View MSA. No confident structure predictions are available.
    2 View Details [122..343] Pfam 111.376751 No description for PF04144.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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