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Protein Overview: FBpp0310587, FBp...

General Information:
Name(s) found: FBpp0310587 [FlyBase]
FBpp0310195 [FlyBase]
CG9518-PA / FBpp0073800 [FlyBase]
Description(s) found:
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  • gi|7293011|gb|AAF48398.1| CG9518 [Drosophila melanogaster] [NCBI NR]
  • gi|24642042|ref|NP_572979.1| CG9518 [Drosophila melanogaster] [NCBI NR]
  • gi|221307618|gb|ACM16685.1| FI02019p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0310587; name=CG9518-PC; parent=FBgn0030590,FBtr0344175; dbxref=FlyBase:FBpp0310587,FlyBase_Annotation_IDs:CG9518-PC; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0310195; name=CG9518-PB; parent=FBgn0030590,FBtr0343598; dbxref=FlyBase:FBpp0310195,FlyBase_Annotation_IDs:CG9518-PB; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9518 (CG9518, FBgn0030590). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:14757022..14765207. It has the cytological map location 12F6-12F7. Based on sequence similarity, it is predicted to have molecular function</span>: choline dehydrogenase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: alcohol metabolic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9518-PA translation from_gene[CG9518 CG9518 FBgn0030590] seq_release:3 mol_weight=78568 cds_boundaries:(X:14,594,901..14,597,009[-]) aa_length:703 transcript_info:[CG9518-RA seq_release:3] gene_info:[gene symbol:CG9518 FBgn0030590 gene_boundaries:(X [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VY08) CG9518 protein [DrosMelano7227.FASTAC.txt]
  • (AE003497) CG9518 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9518-PA [Drosophila melanogaster]gi|24642042|ref|NP_572979.1| CG9518-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398; MD5=3e1e47ee955847b [fly-100309-contam.fasta]
  • CG9518-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG9518 OS=Drosophila melanogaster GN=CG9518-RA PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(14757917..14760028); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398,FlyMine:FBpp0073800,modMine:FBpp0073800; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398,FlyMine:FBpp0073800,modMine:FBpp0073800; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310195; name=CG9518-PB; parent=FBgn0030590,FBtr0343598; dbxref=GB_protein:AHN59719,REFSEQ:NP_001285249,FlyBase:FBpp0310195,FlyBase_Annotation_IDs:CG9518-PB; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310587; name=CG9518-PC; parent=FBgn0030590,FBtr0344175; dbxref=GB_protein:AHN59720,REFSEQ:NP_001285250,FlyBase:FBpp0310587,FlyBase_Annotation_IDs:CG9518-PC; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398,FlyMine:FBpp0073800,modMine:FBpp0073800; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310195; name=CG9518-PB; parent=FBgn0030590,FBtr0343598; dbxref=GB_protein:AHN59719,REFSEQ:NP_001285249,FlyBase:FBpp0310195,FlyBase_Annotation_IDs:CG9518-PB; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310587; name=CG9518-PC; parent=FBgn0030590,FBtr0344175; dbxref=GB_protein:AHN59720,REFSEQ:NP_001285250,FlyBase:FBpp0310587,FlyBase_Annotation_IDs:CG9518-PC; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG9518, isoform A OS=Drosophila melanogaster GN=CG9518-RA PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0073800 type=protein; loc=X:complement(14863884..14865995); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398,FlyMine:FBpp0073800,modMine:FBpp0073800; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310195 type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310195; name=CG9518-PB; parent=FBgn0030590,FBtr0343598; dbxref=GB_protein:AHN59719,REFSEQ:NP_001285249,FlyBase:FBpp0310195,FlyBase_Annotation_IDs:CG9518-PB; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310587 type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310587; name=CG9518-PC; parent=FBgn0030590,FBtr0344175; dbxref=GB_protein:AHN59720,REFSEQ:NP_001285250,FlyBase:FBpp0310587,FlyBase_Annotation_IDs:CG9518-PC; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0073800; name=CG9518-PA; parent=FBgn0030590,FBtr0073983; dbxref=FlyBase:FBpp0073800,FlyBase_Annotation_IDs:CG9518-PA,GB_protein:AAF48398.1,REFSEQ:NP_572979,GB_protein:AAF48398,UniProt/TrEMBL:Q9VY08,FlyMine:FBpp0073800,modMine:FBpp0073800; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310195; name=CG9518-PB; parent=FBgn0030590,FBtr0343598; dbxref=GB_protein:AHN59719,REFSEQ:NP_001285249,FlyBase:FBpp0310195,FlyBase_Annotation_IDs:CG9518-PB,UniProt/TrEMBL:Q9VY08; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(14863884..14865995); ID=FBpp0310587; name=CG9518-PC; parent=FBgn0030590,FBtr0344175; dbxref=GB_protein:AHN59720,REFSEQ:NP_001285250,FlyBase:FBpp0310587,FlyBase_Annotation_IDs:CG9518-PC,UniProt/TrEMBL:Q9VY08; MD5=3e1e47ee955847b4894898556ea0ca96; length=703; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: alcohol metabolic process [IEA]
    Molecular Function: FAD binding [IEA]
    choline dehydrogenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNLLFITT VIKSTFGVVT TGLWLIPLML AAITYYRYDA VDPESRPLDQ LNLYPEYDFI  60
   61 VVGSGSAGAV VANRLSEVRK WKVLLIEAGP DENEISDVPS LAAYLQLSKL DWAYKTEPST 120
  121 KACLGMQNNR CNWPRGRVLG GSSVLNYMLY VRGNRHDYDH WASLGNPGWD YDNVLRYFKK 180
  181 SEDNRNPYLA NNKYHGRGGL LTVQESPWHS PLVAAFVEAG TQLGYDNRDI NGAKQAGFMI 240
  241 AQGTIRRGSR CSTAKAFLRP IRMRKNFHLS MNSHVTRVII EPGTMRAQAV EFVKHGKVYR 300
  301 IAARREVIIS AGAINTPQLM MLSGLGPRKH LEKHGIRVLQ DLPVGENMQD HVGMGGLTFL 360
  361 VDKPVAIVQD RFNPTAVTFQ YVLRERGPMT TLGGVEGLAF VHTPYSNRSL DWPDIQFHMA 420
  421 PASINSDNGA RVKKVLGLKE SVYQEVYHPI ANKDSWTIMP LLLRPRSRGS VKLRSANPFH 480
  481 YPLINANYFD DPLDAKTLVE GAKIALRVAE AQVFKQFGSR LWRKPLPNCK QHKFLSDAYL 540
  541 ECHVRTISMT IYHPCGTAKM GPAWDPEAVV DPRLRVYGVR GLRVIDASIM PTISSGNTNA 600
  601 PVIMIAEKGA DLIKEDWLTN PEYKVKRQAN RLRDPDPASS NIQGIITLPN NITQGDSSNI 660
  661 SDRSNMESNF SNSSHINNIN FNSNSNSSNI ESSSNFTLNY ANS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..624] PSI-BLAST 90.30103 Glucose oxidase
    2 View Details [625..703] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • choline dehydrogenase activity
    		•  4.66965094791663 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  4.10319574017291 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.3417445147889 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.47575323060551 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  1.34149762265767 bayes_pls_golite062009
  • glucose dehydrogenase activity
    		•  1.30840878956762 bayes_pls_golite062009
  • transporter activity
    		•  1.29839290134235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07862908893913 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • monooxygenase activity
    		•  0.72374980280274 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.704326257168965 bayes_pls_golite062009
  • binding
    		•  0.694618787489897 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.556967966402473 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.442625746935807 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.31459693204333 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  0.242456601435627 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.170082356807927 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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