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Protein Overview: mRpS25-PA

General Information:
Name(s) found: mRpS25-PA / FBpp0073762 [FlyBase]
Description(s) found:
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  • gi|85861109|gb|ABC86504.1| IP01949p [Drosophila melanogaster] [NCBI NR]
  • gi|7292989|gb|AAF48377.1| mitochondrial ribosomal protein S25 [Drosophila melanogaster] [NCBI NR]
  • gi|17986025|ref|NP_511153.1| mitochondrial ribosomal protein S25 [Drosophila melanogaster] [NCBI NR]
  • gi|13633946|sp|Q9VY28.1|RT25_DROME RecName: Full=Probable 28S ribosomal protein S25, mitochondrial; Short=S25mt; AltName: Full=MRP-S25 [NCBI NR]
  • gi|117935353|gb|ABK56982.1| IP01952p [Drosophila melanogaster] [NCBI NR]
  • Probable 28S ribosomal protein S25, mitochondrial OS=Drosophila melanogaster GN=mRpS25 PE=1 SV=1 [Swiss-Prot]
  • The gene mitochondrial ribosomal protein S25 is referred to in FlyBase by the symbol Dmel\mRpS25 (CG14413, FBgn0030572). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:14476169..14477015. It has the cytological map location 12F1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG14413-PA translation from_gene[CG14413 mRpS25 FBgn0030572] seq_release:3 mol_weight=19157 cds_boundaries:(X:14,313,201..14,313,907[-]) aa_length:167 transcript_info:[CG14413-RA seq_release:3] gene_info:[gene symbol:mRpS25 FBgn0030572 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VY28) Probable mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) [DrosMelano7227.FASTAC.txt]
  • (AE003496) CG14413 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG14413-PA [Drosophila melanogaster]gi|17986025|ref|NP_511153.1| CG14413-PA [Drosophila melanogaster]gi|13633946|sp|Q9VY28|RT25_DROME Probable mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(14476217..14476388,14476532..14476726,14476790..14476926); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,G [fly-100309-contam.fasta]
  • IP01952p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG14413-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • mitochondrial ribosomal protein S25 CG14413-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Probable mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) [nr-271106-contam.fasta]
  • IP01949p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(14476217..14476388,14476532..14476726,14476790..14476926); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(14476217..14476388,14476532..14476726,14476790..14476926); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Probable 28S ribosomal protein S25, mitochondrial OS=Drosophila melanogaster GN=mRpS25 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(14476217..14476388,14476532..14476726,14476790..14476926); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377,FlyMine:FBpp0073762,modMine:FBpp0073762; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(14582757..14582893,14582499..14582693,14582184..14582355)); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377,FlyMine:FBpp0073762,modMine:FBpp0073762; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(14582757..14582893,14582499..14582693,14582184..14582355)); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377,FlyMine:FBpp0073762,modMine:FBpp0073762; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0073762 type=protein; loc=X:complement(join(14582757..14582893,14582499..14582693,14582184..14582355)); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377,FlyMine:FBpp0073762,modMine:FBpp0073762; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(14582757..14582893,14582499..14582693,14582184..14582355)); ID=FBpp0073762; name=mRpS25-PA; parent=FBgn0030572,FBtr0073945; dbxref=FlyBase:FBpp0073762,FlyBase_Annotation_IDs:CG14413-PA,GB_protein:AAF48377.1,REFSEQ:NP_511153,GB_protein:AAF48377,UniProt/Swiss-Prot:Q9VY28,FlyMine:FBpp0073762,modMine:FBpp0073762; MD5=383220f5ac9ac0e7e938520087489f62; length=167; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 167 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS][NAS]
    Biological Process: translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFMKGREPI RRTLKYLNAG KLVLKDKVRI FSVNYNTYGA HHAGARDFVF WNIPQIQFKN  60
   61 PEVQVLTLKN MTPSPFVRCY FDDGRDMLID LDSRNRNDII DHLVKVVGKT REQLDAEERL 120
  121 KESKDNPANF GYGCGRHCIC EIPGQVPCPG TVPLPDHMRG KILFAPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] FFAS03 4.44 NMR Solution Structure of Subunit B8 from Human NADH-Ubiquinone Oxidoreductase Complex I (CI-B8)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.646676412582618 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.374519363311304 bayes_pls_golite062009
  • binding
    		•  0.310784153497749 bayes_pls_golite062009
  • protein binding
    		•  0.191955497059338 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle