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Protein Overview: Bx42-PA, FBpp0305943

General Information:
Name(s) found: FBpp0305943 [FlyBase]
Bx42-PA / FBpp0071285 [FlyBase]
Description(s) found:
Found 33 descriptions.
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  • type=protein; loc=X:complement(8998505..8999364,8999430..8999990,9000258..9000480); ID=FBpp0305943; name=Bx42-PB; parent=FBgn0004856,FBtr0333809; dbxref=REFSEQ:NP_001259370,GB_protein:AGB95213,FlyBase:FBpp0305943,FlyBase_Annotation_IDs:CG8264-PB; MD5=0edfd74ac4e81d5e5ac9b2a5d7243888; length=547; release=r5.56; species=Dmel; [FlyBase]
  • The gene Bx42 is referred to in FlyBase by the symbol Dmel\Bx42 (CG8264, FBgn0004856). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8998351..9000635. It has the cytological map location 8C9. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: eye-antennal disc development; embryonic development via the syncytial blastoderm. 5 alleles are reported. The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: adult segment; adult mesothoracic segment; organ system; peripheral nervous system; embryonic nervous system; nervous system; mouthpart; external compound sense organ; embryonic peripheral nervous system; anterior scutellar bristle. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    nuclear chromatin [NAS]
    catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: embryonic development via the syncytial blastoderm [IMP]
    eye-antennal disc development [IMP]
    nuclear mRNA splicing, via spliceosome [IC][IEA]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSLLPTP TNAIWDREDE RRLVARGAPK IGALVSAKIA APPYGQRKDW VPHTDADFGD  60
   61 GGAFPEIHVA QYPLGLGAPG NVGKKSDALA VRLDDKGKVK YDAIARQGHG KDKIVYSSIS 120
  121 QLLPAEVLAE DADELQRPDE ETVMETTEET RLALEKLTNQ KITSALPVRH AQKAGPAQYI 180
  181 RYTPSQQGDT FNSGAKQRVI RMVEAQLDPM EPPKFRINKK IPRGPPSPPA PVLHSPSRKV 240
  241 TVKEQKEWKI PPCISNWKNA KGYTIPLDKR LAADGRGLQQ VHINEKFAKM AEALYIADRK 300
  301 AREAVEARSQ LEKKLAQKEK EKKEDMLRMM AQRAREERAG LRNPEAAEPS GSGATGSEVR 360
  361 ERNDLRAERQ RERQRDRNLQ RAAPEKRSKL QKERERDISE QIALGLPAKS AGNGETLFDQ 420
  421 RLFNTTKGMD SGYGDDEAYN VYDKPWRDSN TLGAHIYRPS KQADSDNYGG DLDAIVNTKR 480
  481 FVPDKQFSGA SKEAAAGQRS GPVEFEKEED PFGLDQFLNM AKKAPKRAEE KNNERSSHSD 540
  541 RKRSKRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] deduced N/A No confident structure predictions are available.
    2 View Details [127..445] PSI-BLAST 12.09691 Heavy meromyosin subfragment
    3 View Details [446..547] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle