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Protein Overview: CG1789-PA

General Information:
Name(s) found: CG1789-PA / FBpp0071194 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1789 (CG1789, FBgn0030063). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8614590..8615534. It has the cytological map location 8A3. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation; rRNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 237 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IEA]
    small nucleolar ribonucleoprotein complex [ISS]
    Biological Process: rRNA processing [ISS]
    translation [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSWKNASKS NQKVHRERHQ PESRQHLGFL EKKKDYKKRA IDAQKKQKTL KLLYRRAQNK  60
   61 NPDEFYHHMI NSKLSNDEHH EKDTKDEHTP EQLALMQTQD LKYVVMKRTM ERKKIERLKA 120
  121 SLVDVDAIKG AANKRIKFDE DGYMELDMGE WLLKHDDEEE EEEKKKKSKT TEPNPIKQQR 180
  181 INELKKREQR ERELGIVQQK IQLKNTLKQP RLLKPRKIKP GTKDSAPVYK FRYERKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] FFAS03 1.16 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle