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Protein Overview: Caf1-180-PB

General Information:
Name(s) found: Caf1-180-PB / FBpp0071172 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Caf1-180 is referred to in FlyBase by the symbol Dmel\Caf1-180 (CG12109, FBgn0030054). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8496394..8500335. It has the cytological map location 7F8. Its molecular function is unknown. It is reported to be involved in the biological process</span>: nucleosome assembly. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1183 amino acids

    Gene Ontology:
    Cellular Component: chromatin assembly complex [ISS][NAS]
    Biological Process: nucleosome assembly [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHAGVVKTPL SGRKKDAAVP AKSAEKTASG GKKFVQTRLP FKLLTPGGGA VPTSSSSSSS  60
   61 PATIGSGPVT VILDEDDPAP RKRKLSYDDE SPSEGTGCST GQLRRSTSKE NLDLASSIAT 120
  121 KKVKTTDSVV EDVIELDEDE ADKEIEDQDQ LVEAKSSKEV KLKPKKSEGK KGSPAPIQIK 180
  181 LPLVNKRSKR RKSLKKSEEP LETSTADVAK GDSESSDDIE IIAEELNPQK RQKVQTPREK 240
  241 SPENSSTSGK HTEEVMQKNG KDSKKQEESM KAVKESKKEE PKTAEQNKKN DQATIDLFMG 300
  301 KKMETNKKDK PEVKTTAKDN KKDPLIAEDS KPKEVPKKET SKTGGKGKKE GAKPAEKSKK 360
  361 EEKEDSTTKS KKEKADSPAN NQKEQQIGVK KKTSEPEDAS NSHKSVTAKK DSKKDEASTQ 420
  421 VKSDNESPEA AEISMILSTS EANSSSSEHE MDADTDTAAT DRPSAQKETR LNRKSLPEVT 480
  481 GAPKGLTPKQ QRLMEQRKKA REEKEQKLAE ERRLKQQDKE HREQQKKQER DEKEQQRKLE 540
  541 RDQKEQQRKM EKEEKERKRQ AEVDSKNEEK RKRNEAKEEV QRKKDEERRK KEQEREEAEQ 600
  601 KKKRAAESFS KFFVPKQPKC GSGSNNTSYL EHEQSSCDSS KASSQTLAFR PFQIKDDMLL 660
  661 APIVRNSLGQ EQRSQLDGLF RHRDEEADDE EEEEEQDIVR RKPPNRANLY LSELSSGRRK 720
  721 PLKMQRDVKL QRRTKDEEDD DDVQVIDYLS PAGLPIEVEQ PKQLTRMKAK YLHFADNRRP 780
  781 PYYGTWRKKS SSISARRPLA QDKVLFDYEV DSDCEWEEEE PGESLSASED EKEKESEEES 840
  841 EEEYNEWYVP HGHLSDEELQ NDGDGMEDGH TREAQKAKLQ VLQQEFAQEM KKQTKKIKAR 900
  901 LLGPVWLDEN GNKSELFPAI FAHTIDMYAC WQVEPLSLEP PPEPERQDQT PEQPVPLQLD 960
  961 DRLMQQLVRL THGNRNSKTF LINEYLEYLK TQATAEANQT TLPSKAVLRE KFDELASWKT1020
 1021 VELSTPEAAA ASANSAKKGR KPKKRLCWVV ASDMLEKFQL PDLQLQNQWN YTLTPKVSDG1080
 1081 PDAAQQEQSP PADAVPAASP ASNQTTNSAP TTPISGQTQA GQGVKKRATL IMSVPRDQPI1140
 1141 PSATKNKLIS QFLQRQSDAS KPKEKMQEKP PPIVFDDVVM LSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 23.522879 Heavy meromyosin subfragment
    2 View Details [353..632] FFAS03 1.03 No description for 2i1jA was found.
    3 View Details [633..798] deduced N/A No confident structure predictions are available.
    4 View Details [799..1183] PSI-BLAST 6.0 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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