| Protein: | Caf1-180-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1183 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Caf1-180-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
340.0 | [0..2] | [1114..847] |
|
Region A: Residues: [1-352] |
1 11 21 31 41 51
| | | | | |
1 MHAGVVKTPL SGRKKDAAVP AKSAEKTASG GKKFVQTRLP FKLLTPGGGA VPTSSSSSSS 60
61 PATIGSGPVT VILDEDDPAP RKRKLSYDDE SPSEGTGCST GQLRRSTSKE NLDLASSIAT 120
121 KKVKTTDSVV EDVIELDEDE ADKEIEDQDQ LVEAKSSKEV KLKPKKSEGK KGSPAPIQIK 180
181 LPLVNKRSKR RKSLKKSEEP LETSTADVAK GDSESSDDIE IIAEELNPQK RQKVQTPREK 240
241 SPENSSTSGK HTEEVMQKNG KDSKKQEESM KAVKESKKEE PKTAEQNKKN DQATIDLFMG 300
301 KKMETNKKDK PEVKTTAKDN KKDPLIAEDS KPKEVPKKET SKTGGKGKKE GA
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [353-632] |
1 11 21 31 41 51
| | | | | |
1 KPAEKSKKEE KEDSTTKSKK EKADSPANNQ KEQQIGVKKK TSEPEDASNS HKSVTAKKDS 60
61 KKDEASTQVK SDNESPEAAE ISMILSTSEA NSSSSEHEMD ADTDTAATDR PSAQKETRLN 120
121 RKSLPEVTGA PKGLTPKQQR LMEQRKKARE EKEQKLAEER RLKQQDKEHR EQQKKQERDE 180
181 KEQQRKLERD QKEQQRKMEK EEKERKRQAE VDSKNEEKRK RNEAKEEVQR KKDEERRKKE 240
241 QEREEAEQKK KRAAESFSKF FVPKQPKCGS GSNNTSYLEH
|
| Detection Method: | |
| Confidence: | 1.03 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [633-798] |
1 11 21 31 41 51
| | | | | |
1 EQSSCDSSKA SSQTLAFRPF QIKDDMLLAP IVRNSLGQEQ RSQLDGLFRH RDEEADDEEE 60
61 EEEQDIVRRK PPNRANLYLS ELSSGRRKPL KMQRDVKLQR RTKDEEDDDD VQVIDYLSPA 120
121 GLPIEVEQPK QLTRMKAKYL HFADNRRPPY YGTWRKKSSS ISARRP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [799-1183] |
1 11 21 31 41 51
| | | | | |
1 LAQDKVLFDY EVDSDCEWEE EEPGESLSAS EDEKEKESEE ESEEEYNEWY VPHGHLSDEE 60
61 LQNDGDGMED GHTREAQKAK LQVLQQEFAQ EMKKQTKKIK ARLLGPVWLD ENGNKSELFP 120
121 AIFAHTIDMY ACWQVEPLSL EPPPEPERQD QTPEQPVPLQ LDDRLMQQLV RLTHGNRNSK 180
181 TFLINEYLEY LKTQATAEAN QTTLPSKAVL REKFDELASW KTVELSTPEA AAASANSAKK 240
241 GRKPKKRLCW VVASDMLEKF QLPDLQLQNQ WNYTLTPKVS DGPDAAQQEQ SPPADAVPAA 300
301 SPASNQTTNS APTTPISGQT QAGQGVKKRA TLIMSVPRDQ PIPSATKNKL ISQFLQRQSD 360
361 ASKPKEKMQE KPPPIVFDDV VMLSD
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
