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Protein Overview: FBpp0311239, sni-PA

General Information:
Name(s) found: FBpp0311239 [FlyBase]
sni-PA / FBpp0071131 [FlyBase]
Description(s) found:
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  • gi|7290912|gb|AAF46353.1| sniffer [Drosophila melanogaster] [NCBI NR]
  • gi|24640547|ref|NP_572466.1| sniffer [Drosophila melanogaster] [NCBI NR]
  • gi|21428532|gb|AAM49926.1| LD36273p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:complement(8135611..8136176,8136238..8136289,8136984..8137109); ID=FBpp0311239; name=sni-PB; parent=FBgn0030026,FBtr0344985; dbxref=FlyBase:FBpp0311239,FlyBase_Annotation_IDs:CG10964-PB; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r5.56; species=Dmel; [FlyBase]
  • The gene sniffer is referred to in FlyBase by the symbol Dmel\sni (CG10964, FBgn0030026). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8135531..8137337. It has the cytological map location 7D22. There is experimental evidence that it has the molecular function</span>: carbonyl reductase (NADPH) activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction. 9 alleles are reported. The phenotype of these alleles is annotated with: monopolar laminar cell. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG10964-PA translation from_gene[CG10964 sni FBgn0030026] seq_release:3 mol_weight=26513 cds_boundaries:(X:7,980,527..7,982,022[-]) aa_length:247 transcript_info:[CG10964-RA seq_release:3] gene_info:[gene symbol:sni FBgn0030026 gene_boundaries:(X:7,98 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W3H4) CG10964 protein (LD36273p) [DrosMelano7227.FASTAC.txt]
  • (AE003443) CG10964 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG10964-PA [Drosophila melanogaster]gi|21428532|gb|AAM49926.1| LD36273p [Drosophila melanogaster]gi|24640547|ref|NP_572466.1| CG10964-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(8135611..8136176,8136238..8136289,8136984..8137109); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein [fly-100309-contam.fasta]
  • CG10964-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • sniffer CG10964-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD36273p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(8135611..8136176,8136238..8136289,8136984..8137109); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(8135611..8136176,8136238..8136289,8136984..8137109); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LD36273p OS=Drosophila melanogaster GN=sni PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(8135611..8136176,8136238..8136289,8136984..8137109); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353,FlyMine:FBpp0071131,modMine:FBpp0071131; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353,FlyMine:FBpp0071131,modMine:FBpp0071131; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0311239; name=sni-PB; parent=FBgn0030026,FBtr0344985; dbxref=FlyBase:FBpp0311239,FlyBase_Annotation_IDs:CG10964-PB,GB_protein:AHN59483,REFSEQ:NP_001285012; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353,FlyMine:FBpp0071131,modMine:FBpp0071131; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0311239; name=sni-PB; parent=FBgn0030026,FBtr0344985; dbxref=FlyBase:FBpp0311239,FlyBase_Annotation_IDs:CG10964-PB,GB_protein:AHN59483,REFSEQ:NP_001285012; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0071131 type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353,FlyMine:FBpp0071131,modMine:FBpp0071131; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311239 type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0311239; name=sni-PB; parent=FBgn0030026,FBtr0344985; dbxref=FlyBase:FBpp0311239,FlyBase_Annotation_IDs:CG10964-PB,GB_protein:AHN59483,REFSEQ:NP_001285012; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0071131; name=sni-PA; parent=FBgn0030026,FBtr0071183; dbxref=FlyBase:FBpp0071131,FlyBase_Annotation_IDs:CG10964-PA,GB_protein:AAF46353.1,REFSEQ:NP_572466,GB_protein:AAF46353,UniProt/TrEMBL:Q9W3H4,FlyMine:FBpp0071131,modMine:FBpp0071131; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(8242951..8243076,8242205..8242256,8241578..8242143)); ID=FBpp0311239; name=sni-PB; parent=FBgn0030026,FBtr0344985; dbxref=FlyBase:FBpp0311239,FlyBase_Annotation_IDs:CG10964-PB,GB_protein:AHN59483,REFSEQ:NP_001285012,UniProt/TrEMBL:Q9W3H4; MD5=8043edd0d6034d6cf231a584fc07aafc; length=247; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    Molecular Function: carbonyl reductase (NADPH) activity [IDA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSILITGCN RGLGLGLVKA LLNLPQPPQH LFTTCRNREQ AKELEDLAKN HSNIHILEID  60
   61 LRNFDAYDKL VADIEGVTKD QGLNVLFNNA GIAPKSARIT AVRSQELLDT LQTNTVVPIM 120
  121 LAKACLPLLK KAAKANESQP MGVGRAAIIN MSSILGSIQG NTDGGMYAYR TSKSALNAAT 180
  181 KSLSVDLYPQ RIMCVSLHPG WVKTDMGGSS APLDVPTSTG QIVQTISKLG EKQNGGFVNY 240
  241 DGTPLAW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..247] PSI-BLAST 44.0 Carbonyl reductase Sniffer of D. melanogaster

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • DNA binding
    		•  0.302492036575815 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.150346154405223 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle