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Protein Overview: raptor-PA

General Information:
Name(s) found: raptor-PA / FBpp0070850 [FlyBase]
Description(s) found:
Found 13 descriptions.
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  • The gene raptor is referred to in FlyBase by the symbol Dmel\raptor (CG4320, FBgn0029840). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:5978807..5983739. It has the cytological map location 5D4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding. There is experimental evidence that it is involved in the biological process</span>: cellular response to DNA damage stimulus; positive regulation of protein amino acid phosphorylation. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1624 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of protein amino acid phosphorylation [IMP]
    response to DNA damage stimulus [IMP]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSAVRAKSA AAAVGVAVDE SSGSSNGSVA DQEVASSKEA VLSVLIRKRY EKYVFAPWDD  60
   61 PIILIMEQLE HIEHCRSAAL GNQVAIGRDP SQDDSLNDLG KVISNMRQDQ SLVPIVKHIE 120
  121 QISDIQASNG QELASLGSLR ELIRTIRKEW PRDDSIKLRL KEIQILGMPP ARSLCFGERI 180
  181 RDDRCPLSLQ TKRHKERIQA MMYERQPWRI RERMKTASVA LVLCLNIGVD PPDVVKIQPC 240
  241 SRLECWIDPS SVSPPKAMEL IGSNLQMQYE RWQPRARYKK CNDPTVDDVK KLCTSLRRNA 300
  301 KGERILFHYN GHGVPKPTAN GEIWVFNKTF TQYIPLSIFE LITWMSAPSI YVYDCSNAGI 360
  361 IINSFQPYAK QHEEELGKAL AAAQQRGGVQ QLVGGSGGAA NVAANQVQLT NQMVSYKNCI 420
  421 HLAACAANEI LPMNAQLPAD LFTSCLTTPI NIALKWYAMQ EKLGMVPRIQ SELIDKIPGK 480
  481 VNDRRTMMGE LNWIFTAITD TIAWNTLPRE LFQRLFRQDL LVASLFRNFL LAERILRSHD 540
  541 CTPVSLPALP PCYRHPMWKA WDLVVDLALQ QLPEILDHNA PYRQLPFFEH QLTAFQVWLD 600
  601 SESESRTPPE QLPIVLQVLL SQVHRLRALE LLARFLDLGP WAVNLALGVG IFPYVLKLLQ 660
  661 SSTRELRPVL VFIWAKILAV DPSCQVDLVK EYKYFLSVLQ DTSVSKEHRT LSAFVLSSIV 720
  721 HNFLLGQTSA LQGPLLSICL EQLNDGSWLL RQWLAICLGM LWQNFEKARW SGARDLAHEK 780
  781 LYVLLRDSIP EVRAAAVFAL GTFISSVTDR SEEQANNIDR IIAITMLETV GEDMSPLVRM 840
  841 ELAAALQWMV VLFESQFVAV YLTEHMRGHV SAASFVMCPD PRDLTSSTHS LERHVTIRRG 900
  901 ASSSSISNMG GASISSGTGS SSNPLGRSKS GSGSSGGRGA AGAAGGTNSI PFQSIFTKLW 960
  961 LGICNLAQDP FPRVAAIAQE IVEHVRDTAL CPIMAAKEAT MANASEKCSS LSVSLPPSPN1020
 1021 TRVNYLGGGG APGGAGATAE SPPVGAAASG ASHWAQKLRL SGSGACMGAG DPQTILQRKL1080
 1081 RTSSINDETD SGPGYSRGVA GAGTGLGLPS GPRESTHSAR SSGSESNHYL EPGHSLTPIV1140
 1141 LTEFIPWAIS YFTRPGKERY SSAEGSAEEG RQRFPVDRNS AELRRRRLRF LRNDFVRRHA1200
 1201 GRKHQELIDP YGFDVCVWNR KTQFTPSIVK LLPYEPQIAV AYREKVLVYD FQYNSVRTYG1260
 1261 AESLGGNFTG YSSGYGSGSG SSSSLNGSTP RKSGAHTSGG GGGGFSAAPF ARVSSIEFIN1320
 1321 AQDMALNLVA HEDGVVRVWQ SSPPASSATS EDTPSKARLV TAWTALGQVN QHNHRQRSVA1380
 1381 SGGSIGKGAD ASGLSSAAIG SGGIVTAWQQ CSQHLVIGGG GCRFIRIWDV ERELKLADIP1440
 1441 LGRSETCARV LSPYLPNMRS DVILAGCDDG SVRLFDKRCA PQDAGISVYR RHSAPILHAS1500
 1501 LRANGLVLVS GCTEGRISVA DMRGSQSSIN PFDVVYEWDA GGDVTAITSH QLEDTVACGN1560
 1561 ASKIVIYSLD GRQQKVLRTN EGFIGPKIGH PTYLYFHPYK AQLAVGFVDN TVAIYSPTPG1620
 1621 REQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] deduced N/A No confident structure predictions are available.
    2 View Details [185..387] deduced N/A No confident structure predictions are available.
    3 View Details [388..465] MSA 1.052979 View MSA. No confident structure predictions are available.
    4 View Details [466..604] deduced N/A No confident structure predictions are available.
    5 View Details [605..788] deduced N/A No confident structure predictions are available.
    6 View Details [789..907] deduced N/A No confident structure predictions are available.
    7 View Details [908..1079] deduced N/A No confident structure predictions are available.
    8 View Details [1080..1624] PSI-BLAST 58.69897 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • protein binding
    		•  1.55077580673733 bayes_pls_golite062009
  • binding
    		•  1.08608092567186 bayes_pls_golite062009
  • kinase activity
    		•  0.669128319788015 bayes_pls_golite062009
  • protein kinase activity
    		•  0.667040922251547 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.653861601810668 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.589854287997742 bayes_pls_golite062009
  • transferase activity
    		•  0.410839782967019 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0214965241855714 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.00561812243407855 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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