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Protein Overview: FBpp0310166, CHO...

General Information:
Name(s) found: FBpp0310166 [FlyBase]
CHOp24-PA / FBpp0070643 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=X:join(4435036..4435177,4435250..4435584,4435940..4436089); ID=FBpp0310166; name=CHOp24-PB; parent=FBgn0029709,FBtr0343566; dbxref=FlyBase:FBpp0310166,FlyBase_Annotation_IDs:CG3564-PB; MD5=6c3a127d81f2b921f4e35b8b79c9d1b6; length=208; release=r5.56; species=Dmel; [FlyBase]
  • The gene CHOp24 is referred to in FlyBase by the symbol Dmel\CHOp24 (CG3564, FBgn0029709). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:4434943..4436471. It has the cytological map location 4C7. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    COPI vesicle coat [ISS]
    Biological Process: transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTLAKVLL LVGSLLILCR TSHAFIVSVD AHNEECFFEN VEGGTKFGVT FEVIDGGFLD  60
   61 VDIKISGPDN HVMHESEKES SGKYTFVAPA KGTYTVCFNN ERSSMTPKLV MFSIDVGDAP 120
  121 QRAPGAPGEE EVGHTKLEDM IRELSGTLTS VKHEQEYMHV RDKIHRSVNE NTNSRVVLWS 180
  181 TFEALVLVLM TVGQVYYLKR FFEVKRVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] FFAS03 0.987 No description for 2yrlA was found.
    2 View Details [133..208] MSA 6.215996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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